Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq32636 145 2e-29 seq18898 141 2e-28 seq36087 134 3e-26 seq27463 129 1e-24 seq33871 122 2e-22 seq33159 114 3e-20 seq16804 98.7 2e-15 >seq32636 Length=346 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| ||||||||||| || |||||||| |||| ||| ||||| | || || Sbjct 316 CGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTG 257 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| || || || |||||||| |||||||||||||| ||| ||| ||| Sbjct 256 CGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCT 197 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || || | |||||| | | || || ||||| Sbjct 196 TCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAG 137 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| ||||| || ||||| || ||||| Sbjct 136 GTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTG 99 >seq18898 Length=402 Score = 141 bits (156), Expect = 2e-28 Identities = 168/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || ||||| |||| |||||||| | | ||| Sbjct 83 CGAAGACGTAGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTG 142 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || ||||| || |||||||||||||| ||| ||| || Sbjct 143 CGACCATCTTCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCC 202 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| |||||| ||||| ||||| | | |||||| || | Sbjct 203 TCCTTGTCTTGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGG 262 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| ||||| ||||| || || |||||||||||||| |||||| Sbjct 263 GTGATTGTCTTTCCCGTTAGGGTCTTCACAAAAATTTG---CATTTT 306 >seq36087 Length=321 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| ||||||| || | || ||||| |||||||| |||| |||||||||| | ||| Sbjct 220 TCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGT 161 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||| || ||||| || || ||||||||||| ||||||||||| || || || Sbjct 160 GCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGGATGCC 101 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || || || |||||| ||| | ||||| | || || || ||||| Sbjct 100 CTCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACTTCCAA 41 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| ||||| || ||||||||||| || || Sbjct 40 CGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTG 2 >seq27463 Length=372575 Score = 129 bits (142), Expect = 1e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| |||| || | ||| || || || ||||| |||| ||||||||| | |||||| Sbjct 145644 TCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAAAGT 145703 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||||||||| ||| || ||||||||||| | | ||||| || || ||| || Sbjct 145704 GCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCC 145763 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 ||| || ||||| ||| || || || ||||| ||||| | | ||| || || | Sbjct 145764 CTCTTTGTCTTGAAT-TTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTA 145822 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| || || ||||||||||| ||||| || || || || Sbjct 145823 ACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTG 145862 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||||||||| || ||||||||||||||| | |||||| | || |||||| Sbjct 145744 AAAGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTTTGTCGGACTACAACA 145685 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 ||||||| || || || |||||| | |||||||| |||||| Sbjct 145684 TCCAGAAGGAATCAACACTTCACTTGGTTTTGAGGCTTCGA 145644 >seq33871 Length=3159 Score = 122 bits (134), Expect = 2e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || |||||||| |||| ||||||||||| | || Sbjct 2905 CGAAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTG 2964 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| |||||||| ||||||||||| | | ||||||||| || ||| ||| Sbjct 2965 CGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCT 3024 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||| || ||| || || || || | |||||||| | ||| || ||||| Sbjct 3025 TCCTTGTCCTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAA 3083 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || ||||| || || || || Sbjct 3084 GGTGATGGTTTTGCCAGTTAGGGTTTTAACGAAGATCTG 3122 >seq33159 Length=163697 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | |||||| || |||||||| |||| ||||||||| | | || Sbjct 97924 CGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTG 97865 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| |||||||| ||||||||||| | | ||||||||| || ||| || Sbjct 97864 CGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCC 97805 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||| || ||| || ||| | || || | | || || ||||| Sbjct 97804 TCCTTGTCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAAT 97745 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || || ||||| ||||| || || Sbjct 97744 GTGATGGTTTTACCAGTCAGTGTTTTTACAAAGATCTG 97707 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || |||||||| |||| ||||||||||| | || Sbjct 98152 CGAAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTG 98093 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| |||||||| ||||||||||| | | ||||||||| || ||| ||| Sbjct 98092 CGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCT 98033 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||| || ||| || ||||| || | |||||| | | || || |||| Sbjct 98032 TCCTTGTCCTGGAT-TTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAG 97974 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | ||||| || || || || Sbjct 97973 AGTGATGGTTTTACCAGTCAAGGTTTTTACGAAGATCTG 97935 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| ||||||||||| | || | ||||| Sbjct 97003 AGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTACGACCATCC 96944 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||||||||| | | ||||||||| || ||| || || ||| Sbjct 96943 TCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 96884 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || ||| | ||||| | | || || ||||| ||||| ||| Sbjct 96883 TGGATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGTGATAGTC 96824 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || ||||||||||| || Sbjct 96823 TTGCCGGTCAATGTCTTCACAAAAATCTG 96795 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || |||||||| |||| ||| ||||| | | || | ||||||||| | |||| Sbjct 97678 TGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGAGAGTGTGCGTCCATCTTCTAACTGC 97619 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| | || |||||||| || ||| ||||| ||||| || || Sbjct 97618 TTGCCAGCAAAGATCAACCGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATTTTA 97559 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || |||| ||| || | | ||| || || | ||||| ||||||||||| Sbjct 97558 GCCTTGACATTCTCGATGGTATCCGAAGGTTCAACTTCTAGGGTGATGGTCTTACCCGTC 97499 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | || |||||||| ||||| Sbjct 97498 AAGGTCTTCACAAAGATTTG 97479 >seq16804 Length=240 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || ||||||||||| ||||| ||||| || ||| || || ||| Sbjct 238 TCCAGCTGTTTACCAGCGAAGATGAGTCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 179 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| ||| | ||| || | || ||||| ||||| ||||| ||| Sbjct 178 TGGATCTTAGCCTTCACATTTTCAATGGTATCAGATGGCTCTACTTCCAAAGTGATGGTC 119 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| |||||||| || || Sbjct 118 TTGCCAGTAAGAGTCTTCACAAAGATCTG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178008204701490