Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq33159 140 3e-28 seq18898 136 4e-27 seq33871 131 2e-25 seq32636 125 7e-24 seq21507 123 2e-23 seq39759 118 1e-21 seq27463 114 1e-20 seq27267 105 7e-18 seq16804 87.8 2e-12 seq28415 82.4 8e-11 >seq33159 Length=163697 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||||||||| | || || ||||||||||| | || |||||| || | Sbjct 97932 ATGCAGATCTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTGGAAGTCGAGCCCTCG 97991 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||||| ||||| || || |||||| | ||||| Sbjct 97992 GACACCATTGAGAATGTGAAAGCTAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 98051 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 98052 CAGAGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCTGACTACAAC 98111 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||||||||||| ||| | | ||||| Sbjct 98112 ATCCAGAAGGAGTCTACCCTTCATTTGGTGCTCCGTCTTCGTGGCGG 98158 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || | || ||||| || |||||| | || || ||| | Sbjct 96789 AAGATGCAGATTTTTGTGAAGACATTGACCGGCAAGACTATCACCTTGGAGGTGGAGCCT 96848 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | ||| |||||| || |||| ||||| ||||| |||||| | ||| Sbjct 96849 TCGGACACAATTGAAAATGTTAAAGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGAC 96908 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| || | || | ||| |||||||||||||| || | || || ||| |||||| Sbjct 96909 CAGCAGAGGTTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACACTCTCTGACTAC 96968 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| | || || || |||||||| ||| Sbjct 96969 AACATCCAGAAGGAGTCTACCCTTCACTTGGTGCTCCGT 97007 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || |||||||| || || || ||||||||||| | || || ||| | | Sbjct 97704 ATGCAGATCTTTGTAAAAACACTGACTGGTAAAACCATCACATTGGAAGTTGAGCCTTCT 97763 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| |||| | ||||| | ||||| ||||| |||||| | ||||| Sbjct 97764 GATACTATTGAAAATGTTAAGGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 97823 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 97824 CAGAGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCAGACTACAAC 97883 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || |||||||| ||| Sbjct 97884 ATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCCGT 97919 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || ||||| || || || || || ||||| | || || || | | Sbjct 97247 AATGCAGATTTTTGTTAAAACACTAACAGGGAAGACTATCACATTAGAGGTGGAACCATC 97306 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||||| |||||| | || || || || |||||| | || || Sbjct 97307 AGACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGATCA 97366 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||||| || ||||| || || | ||||| || ||||||||| Sbjct 97367 GCAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCCGACTACAA 97426 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| ||| | || || || |||||||| ||||||||||| ||| Sbjct 97427 TATTCAAAAAGAATCTACACTTCACTTGGTGCTCCGTTTGAGAGGAGGC 97475 >seq18898 Length=402 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| || || || || || ||||| || || |||||| |||| || || ||| Sbjct 306 AAAATGCAAATTTTTGTGAAGACCCTAACGGGAAAGACAATCACCCTCGAGGTAGAAGCC 247 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | ||| | || | || |||| ||||| ||||| ||||| | ||| Sbjct 246 TCTGACACTATCGAAAATGTGAAGGCTAAGATCCAAGACAAGGAGGGTATTCCTCCTGAC 187 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| || | ||||| || ||||||| Sbjct 186 CAGCAGCGTCTGATATTCGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGACTAC 127 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| |||||| | || || || |||||||| ||| | | ||||| Sbjct 126 AATATCCAGAAGGAATCTACCCTTCACTTGGTGCTACGTCTTCGTGGCGG 77 >seq33871 Length=3159 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||||||||||||| | || || || | | Sbjct 3125 ATGCAGATCTTCGTTAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTGGAACCTTCA 3066 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||||| ||||| || || |||||| | ||||| Sbjct 3065 GACACCATTGAGAATGTCAAAGCTAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 3006 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 3005 CAGAGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCTGACTACAAC 2946 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||||||| ||| | | ||||| Sbjct 2945 ATCCAGAAGGAGTCTACCCTTCACTTGGTGCTCCGTCTTCGTGGCGG 2899 >seq32636 Length=346 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || ||||| || |||||||||||| | || || ||| | | Sbjct 95 AATGCAAATCTTCGTGAAGACCCTCACTGGTAAAACCATCACCTTGGAAGTGGAGCCTTC 154 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | || | || |||| ||||| || || ||||| | ||||| Sbjct 155 GGACACCATTGAGAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 214 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| |||||||| ||||| || | |||||||| |||||| || Sbjct 215 GCAGCGTCTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACCCTGTCCGACTATAA 274 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || || | ||||||||| Sbjct 275 CATCCAGAAGGAGTCCACCCTCCACCTTGTGCTGCGT 311 >seq21507 Length=372 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||||||||| |||||||| | || || ||| || Sbjct 19 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTAGAGGTTGAGCCC 78 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | | | ||| | |||| ||||||| ||||| |||||||| ||| | || Sbjct 79 TCCGATACCATCGAAAATGTGAAAGCCAAAATCCAAGACAAGGAGGGAATCCCCCCAGAT 138 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || | || | ||||| |||||||| || |||| ||||| ||| |||||| Sbjct 139 CAGCAAAGGTTAATCTTTGCGGGTAAACAGCTAGAAGACGGCCGCACACTCTCAGACTAC 198 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| || || | || || || ||||||| | ||| | || ||| Sbjct 199 AATATCCAGAAAGAGTCTACCCTCCACCTGGTGCTCAGATTGCGCGGTGGC 249 >seq39759 Length=128263 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 132705 GCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTC 132764 ||| ||||| || ||||| |||||||| || || || || ||||| || ||||| ||| Sbjct 68996 GCCTATCAGATCTACGAGTAGCCTGTCAGCAACAAATTCAATGTACTGTGACATTAGTTC 68937 Query 132765 GCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGC 132824 || || | || ||||| ||||| |||||||| ||||| | || ||||| || | Sbjct 68936 ACAGTTCATGCCGAGCAGTCGCACGGGCAGCGCGTCGGTCAAGAACTCCTGCTCAATTAC 68877 Query 132825 GACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884 ||||| || ||| || | | || ||| || ||| ||| ||| || | |||||| Sbjct 68876 CACCGCATCCCTGATTATCTGCAGCACACGCTCCTTGCTTGGCTTTTGAACTAGATGCTT 68817 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 |||||||| ||| |||||||| |||||| |||| Sbjct 68816 GAACATCAGGCATGCAAAGTCTGTATGCAAACCCT 68782 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || || ||||| || || ||||||||||||| |||||||| | ||| || || | Sbjct 67334 CCTCATCTCTAGAAATTAGCTCATTGCTGAAAGTCAGACCGGGCATCAAGCCCCGCTTCT 67275 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | | ||| ||||| | ||| || || || |||||||||| || || || || || || | Sbjct 67274 TCAACCAGAATATTGAGGCAAAGCTTCCGGAAAAGAAGATTCCTTCTACAGCTGCAAAGG 67215 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 | || | || || || || | || ||| ||| | ||||| |||| ||||| || | Sbjct 67214 CAACTATCCGTTCCCCAAAGTTTGCAGTTTTACTGCCAATCCATTGCAGTGCCCAGTCTG 67155 Query 133097 CCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAA 133139 |||||| || || || || | ||||| || || || || || Sbjct 67154 CCTTTTTCTTTACACATGGTAAAGTTTCAATTGCATTGAATAA 67112 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATAC 133441 ||||||| | ||||| ||||| || ||||| || || || || |||||||||||||| Sbjct 66152 CCTTGGATAAATCCACTTCCTCCACTGTCCAGAATGAAGCTTCAGCTTTTTTGTACATTT 66093 Query 133442 TCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501 ||| || || | |||||| ||||| || || || || || || || ||||| ||||| | Sbjct 66092 GCCAGATATCAGGATATTGGATGGGGAAGATGACGAAACGCCGCGGATTTTCACGCAAGA 66033 Query 133502 GCGGCTCC 133509 | || ||| Sbjct 66032 GTGGTTCC 66025 >seq27463 Length=372575 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || |||||| || ||||| ||||| |||||||| |||||||| || | || || || || Sbjct 145869 AACAATGCAGATCTTCGTTAAAACCCTCACGGGTAAAACCATAACGTTAGAGGTTGAAGC 145810 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | ||| | |||| ||||| | ||||||||||| ||||| | || Sbjct 145809 CTCTGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCACCAGA 145750 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || || | | || | ||| ||||||||| |||| || | ||||| | ||||| Sbjct 145749 TCAGCAAAGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTTTGTCGGACTA 145690 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||||||| |||||| | || || || ||||| Sbjct 145689 CAACATCCAGAAGGAATCAACACTTCACTTGGT 145657 >seq27267 Length=86652 Score = 105 bits (116), Expect = 7e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCG 107722 || || |||||| |||||||| ||||| | | |||| ||| || ||||| || | Sbjct 7021 CTCGATGTTGCCGAGGTCGCCAACGTGGCGCACGGTGGCGGTGGGTGCACCGTGCTCCTG 6962 Query 107723 CTTCGTCGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTC 107782 ||| | |||||||| || ||||||| |||||||| ||||| | ||||||||| || Sbjct 6961 CTTGTTGGGGTTGAAGTGAGCGCCGGCGGACGTGCACCCGTTTGTATTGTCGCCGAATTC 6902 Query 107783 GTGCACGTGGAAGCCGTG 107800 |||||||||||||||||| Sbjct 6901 GTGCACGTGGAAGCCGTG 6884 >seq16804 Length=240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || ||||| |||||||| | || || ||| | | Sbjct 86 AATGCAGATCTTTGTGAAGACTCTTACTGGCAAGACCATCACTTTGGAAGTAGAGCCATC 145 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | ||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 146 TGATACCATTGAAAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 205 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 |||||| ||||| | ||| || ||||||||||| Sbjct 206 ACAGCGACTCATCTTCGCTGGTAAACAGCTGGA 238 >seq28415 Length=359998 Score = 82.4 bits (90), Expect = 8e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 38379 GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCG 38438 |||||||| |||||||| || | ||||||||| |||||||||||||| ||||| | Sbjct 101863 GCGGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGACTACAACATCCAGAAGGAGTCC 101804 Query 38439 ACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| |||||||||| ||| | || ||| Sbjct 101803 ACACTGCACCTGGTGCTGCGCTTGCGCGGTGGC 101771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499794731884800