Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23]
60,470 sequences; 374,815,656 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq34861 134 2e-26
seq39759 82.4 9e-11
>seq34861
Length=230841
Score = 134 bits (148), Expect = 2e-26
Identities = 470/720 (65%), Gaps = 19/720 (3%)
Strand=Plus/Plus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|| ||||| | || | |||||||| |||||||||| |||||||||||||| || ||
Sbjct 60759 TAAATGTTTGATGTAAATGGTTCAAATGATTCATTATTTCCCAAGATTTGTGCTGTAGAT 60818
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || |||||||| || | ||||| || ||||| || | || || ||||
Sbjct 60819 GCCGTGGGCATTGGGGCTAATAAAAGTGAATTGCGAAGTCCATATTTGGCAATTTTTTCC 60878
Query 106055 TTGAGAACATCCCAGTCGTA--GTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTGA 106111
|| | |||| |||||| | | | || | | |||| | |||||||||||| ||||
Sbjct 60879 TTTAAAACAGTCCAGTCCCACAGATCAGTTGGAGTTTTA---TCCCACATATCATATTGC 60935
Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171
| | || ||| | ||| || ||| | || ||| || || ||| ||
Sbjct 60936 AAGATGCCCTGGCTTGCCGGACTTCCTTCATAAGTACTATAAACTCCATGTTTTTCCGCG 60995
Query 106172 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231
| ||| || || || || | | | ||| || || ||||||||||| | || |
Sbjct 60996 AGTTCGCAACTGGCTTCTAATGCTCCGTAGTATATTGTTTCAAAGATTTGTTGGTTAAGT 61055
Query 106232 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACC 106290
| | || || || ||| ||| ||| || || | |||| ||| || | |||
Sbjct 61056 TTAATTGCGTCTTCACTTTCATATGGAATGCG-CATAAGTACAAATGTATCGGCTAAACC 61114
Query 106291 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGG 106349
||| || || | ||| || |||||||||||||| ||||| || || ||| || |
Sbjct 61115 TTGCACTCCAATACCTATCGGTCTGTGTCGCATGTTAGAATTCTTTGCT-TCTGGCACTG 61173
Query 106350 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 106409
| || | || ||||||| | |||||||| | || | |||| |||| ||| |
Sbjct 61174 GGTAGTAGTTAACATCAATGATTTTATTTAGATTCTGTGTTATTGTCTTCGTGACTTCTT 61233
Query 106410 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATA-CTTTGGAAGGGCGATT 106468
| |||| | ||| | | || | |||||||| ||| | || | || | | |||
Sbjct 61234 TCAATTTTGTAAAATTATATGTTTTA---TCTTCATTAACAAATCTATTTAACG-CAATT 61289
Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATC--CTTATCTGTGTACTCTAAAATTTCTGTAC 106526
|| ||||| || || || || ||||| || | || || || | |||||| ||||
Sbjct 61290 GAAGCCAAGTTACAGACTGCAACTTCATCTGCTGAA--GTATATTCAACAATTTCAGTAC 61347
Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586
|||| || | ||||| || || | ||| ||||| ||||| ||| | || || | ||
Sbjct 61348 ACAAATTACTGCATTTAATGGTGCCAAGATTTTTTTGATTACTTTTTCTATTACATGAAT 61407
Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646
| ||||| |||||||| || || || || || |||| || | |||||||||||||
Sbjct 61408 CTTTGTACAGCATGTATGGTGTGCCTGTTTCGACTTGTGCCTCTATTATTGCCTTCCACA 61467
>seq39759
Length=128263
Score = 82.4 bits (90), Expect = 9e-11
Identities = 152/223 (68%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
||||||||| ||||| || ||||| ||| || || ||||| | ||||||||||
Sbjct 67334 CCTCATCTCTAGAAATTAGCTCATTGCTGAAAGTCAGACCGGGCATCAAGCCCCGCTTCT 67275
Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412
||||||| | || | | || ||||| |||||||| || || ||| ||||| |
Sbjct 67274 TCAACCAGAATATTGAGGCAAAGCTTCCGGAAAAGAAGATTCCTTCTACAGCTGCAAAGG 67215
Query 117413 CAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCCCATTTCG 117472
||| | || || | ||| || || || ||| ||||| || |||||| | |
Sbjct 67214 CAACTATCCGTTCCCCAAAGTTTGCAGTTTTACTGCCAATCCATTGCAGTGCCCAGTCTG 67155
Query 117473 CCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 117515
|||| |||| | |||||||| ||||| || || | |||||
Sbjct 67154 CCTTTTTCTTTACACATGGTAAAGTTTCAATTGCATTGAATAA 67112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589534848262800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |