Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq34861 134 2e-26 seq39759 82.4 9e-11 >seq34861 Length=230841 Score = 134 bits (148), Expect = 2e-26 Identities = 470/720 (65%), Gaps = 19/720 (3%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | || | |||||||| |||||||||| |||||||||||||| || || Sbjct 60759 TAAATGTTTGATGTAAATGGTTCAAATGATTCATTATTTCCCAAGATTTGTGCTGTAGAT 60818 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || |||||||| || | ||||| || ||||| || | || || |||| Sbjct 60819 GCCGTGGGCATTGGGGCTAATAAAAGTGAATTGCGAAGTCCATATTTGGCAATTTTTTCC 60878 Query 106055 TTGAGAACATCCCAGTCGTA--GTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTGA 106111 || | |||| |||||| | | | || | | |||| | |||||||||||| |||| Sbjct 60879 TTTAAAACAGTCCAGTCCCACAGATCAGTTGGAGTTTTA---TCCCACATATCATATTGC 60935 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171 | | || ||| | ||| || ||| | || ||| || || ||| || Sbjct 60936 AAGATGCCCTGGCTTGCCGGACTTCCTTCATAAGTACTATAAACTCCATGTTTTTCCGCG 60995 Query 106172 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231 | ||| || || || || | | | ||| || || ||||||||||| | || | Sbjct 60996 AGTTCGCAACTGGCTTCTAATGCTCCGTAGTATATTGTTTCAAAGATTTGTTGGTTAAGT 61055 Query 106232 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACC 106290 | | || || || ||| ||| ||| || || | |||| ||| || | ||| Sbjct 61056 TTAATTGCGTCTTCACTTTCATATGGAATGCG-CATAAGTACAAATGTATCGGCTAAACC 61114 Query 106291 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGG 106349 ||| || || | ||| || |||||||||||||| ||||| || || ||| || | Sbjct 61115 TTGCACTCCAATACCTATCGGTCTGTGTCGCATGTTAGAATTCTTTGCT-TCTGGCACTG 61173 Query 106350 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 106409 | || | || ||||||| | |||||||| | || | |||| |||| ||| | Sbjct 61174 GGTAGTAGTTAACATCAATGATTTTATTTAGATTCTGTGTTATTGTCTTCGTGACTTCTT 61233 Query 106410 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATA-CTTTGGAAGGGCGATT 106468 | |||| | ||| | | || | |||||||| ||| | || | || | | ||| Sbjct 61234 TCAATTTTGTAAAATTATATGTTTTA---TCTTCATTAACAAATCTATTTAACG-CAATT 61289 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATC--CTTATCTGTGTACTCTAAAATTTCTGTAC 106526 || ||||| || || || || ||||| || | || || || | |||||| |||| Sbjct 61290 GAAGCCAAGTTACAGACTGCAACTTCATCTGCTGAA--GTATATTCAACAATTTCAGTAC 61347 Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586 |||| || | ||||| || || | ||| ||||| ||||| ||| | || || | || Sbjct 61348 ACAAATTACTGCATTTAATGGTGCCAAGATTTTTTTGATTACTTTTTCTATTACATGAAT 61407 Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 | ||||| |||||||| || || || || || |||| || | ||||||||||||| Sbjct 61408 CTTTGTACAGCATGTATGGTGTGCCTGTTTCGACTTGTGCCTCTATTATTGCCTTCCACA 61467 >seq39759 Length=128263 Score = 82.4 bits (90), Expect = 9e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||| ||||| || ||||| ||| || || ||||| | |||||||||| Sbjct 67334 CCTCATCTCTAGAAATTAGCTCATTGCTGAAAGTCAGACCGGGCATCAAGCCCCGCTTCT 67275 Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412 ||||||| | || | | || ||||| |||||||| || || ||| ||||| | Sbjct 67274 TCAACCAGAATATTGAGGCAAAGCTTCCGGAAAAGAAGATTCCTTCTACAGCTGCAAAGG 67215 Query 117413 CAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCCCATTTCG 117472 ||| | || || | ||| || || || ||| ||||| || |||||| | | Sbjct 67214 CAACTATCCGTTCCCCAAAGTTTGCAGTTTTACTGCCAATCCATTGCAGTGCCCAGTCTG 67155 Query 117473 CCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 117515 |||| |||| | |||||||| ||||| || || | ||||| Sbjct 67154 CCTTTTTCTTTACACATGGTAAAGTTTCAATTGCATTGAATAA 67112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589534848262800