Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq33159 181 2e-40 seq32636 154 3e-32 seq36087 147 5e-30 seq33871 143 6e-29 seq27463 120 7e-22 seq16804 91.5 3e-13 >seq33159 Length=163697 Score = 181 bits (200), Expect = 2e-40 Identities = 163/205 (80%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || || ||||||||||||||||| |||| ||| || | |||||||||||||| Sbjct 97451 GTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAAAGTGTGCGACCATCTTCGAGCTG 97392 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || |||||||| ||||| || ||||| ||||||||||| || ||||||||||| Sbjct 97391 CTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTATCTTGAATTTT 97332 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || |||||||||||||| || |||||| || | || | ||||| ||||| Sbjct 97331 TGCTTTAACATTCTCAATGGTGTCTGATGGTTCCACCTCTAATGTGATAGTCTTCCCTGT 97272 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||| || || | |||||| Sbjct 97271 TAGTGTTTTAACAAAAATCTGCATT 97247 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||||| || || || ||||| || | || || | |||||||| |||||| Sbjct 98134 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCTAGCTGC 98075 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | | || |||||||| ||||||||||| ||||| || ||||| Sbjct 98074 TTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTA 98015 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || ||||||||||||||||| || ||||| || || | || || || ||| Sbjct 98014 GCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGTTTTACCAGTC 97955 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || ||||||||||| | ||||| Sbjct 97954 AAGGTTTTTACGAAGATCTGCAT 97932 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||| || | || || | |||||||| ||||| Sbjct 97907 GTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGTCCATCTTCTAGCTG 97848 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | | || |||||||| ||||| || || |||||||||||||| Sbjct 97847 CTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATTTT 97788 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| || || ||| || ||||| | || | || || || || Sbjct 97787 AGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTTTTACCAGT 97728 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || | ||||| Sbjct 97727 CAGTGTTTTTACAAAGATCTGCAT 97704 Score = 111 bits (122), Expect = 3e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| || || || || |||||||| || | | || | ||||| || | ||| Sbjct 97223 GTGAAGAGTAGATTCCTTCTGGATATTGTAGTCTGACAATGTACGTCCATCCTCCAACTG 97164 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | | || |||||||| ||||||||||| || ||||| || || Sbjct 97163 TTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATCTT 97104 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| ||||| || ||| ||||| | || | ||||| || || Sbjct 97103 CGCCTTAACATTTTCAATTGTGTCGGAGGGTTCAACTTCCAATGTGATGGTCTTCCCAGT 97044 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| ||||| | ||||| Sbjct 97043 CAAGGTTTTGACGAAAATCTGCAT 97020 >seq32636 Length=346 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || || || |||| || || | |||||||| Sbjct 304 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATCTTCC 245 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || |||||||| || || || |||||||||||||||||||| ||||| || Sbjct 244 AGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGG 185 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || |||||||||||||||||| |||||||| | ||| | || || Sbjct 184 ATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATGGTTTTA 125 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | ||||||| Sbjct 124 CCAGTGAGGGTCTTCACGAAGATTTGCATT 95 >seq36087 Length=321 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||||||| | || ||||||||||| || || |||||||| || | ||||| | Sbjct 216 AGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGA 157 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| |||||||| ||||| |||||||| ||||| || ||||| || || ||||| || Sbjct 156 CCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCC 97 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| ||||| ||| || || ||||| ||||| || |||||||| | || Sbjct 96 TTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACTTCCAACGTG 37 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 | ||||| || || | ||||| || || Sbjct 36 ATGGTCTTGCCCGTAAGCGTTTTCACAAA 8 >seq33871 Length=3159 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || || ||||| || | || || | |||||||| ||||| Sbjct 2922 GTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCTAGCTG 2981 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | | || |||||||| ||||||||||| ||||| || ||||| Sbjct 2982 CTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTT 3041 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| |||||||||||||| ||| ||||||||| | ||| | || || || || Sbjct 3042 AGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGGTTTTGCCAGT 3101 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | ||||| Sbjct 3102 TAGGGTTTTAACGAAGATCTGCAT 3125 >seq27463 Length=372575 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||||||| | |||||| || || || || || || ||||| || | | ||| | Sbjct 145648 AGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAAAGTGCGT 145707 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | ||| || || |||||||| | || ||| || ||||| |||||||| ||| Sbjct 145708 CCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCCTCT 145767 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||||||||| || || || || || ||||| || ||| || || | || Sbjct 145768 TTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTAACGTT 145827 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || || || || | ||||| ||||| | |||||| Sbjct 145828 ATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCATT 145866 >seq16804 Length=240 Score = 91.5 bits (100), Expect = 3e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || ||||| ||||| |||||||| ||||| ||||||||||| ||||| || || ||||| Sbjct 238 TCCAGCTGTTTACCAGCGAAGATGAGTCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 179 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || ||| || || |||||||| || || || ||||| | || | ||| Sbjct 178 TGGATCTTAGCCTTCACATTTTCAATGGTATCAGATGGCTCTACTTCCAAAGTGATGGTC 119 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || | ||| || || || | |||||| Sbjct 118 TTGCCAGTAAGAGTCTTCACAAAGATCTGCATT 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108622004860490