Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq27463 149 4e-31 seq18898 113 3e-20 seq55175 111 1e-19 seq32636 100 2e-16 seq33159 91.5 1e-13 seq21507 89.7 3e-13 seq36087 87.8 1e-12 >seq27463 Length=372575 Score = 149 bits (164), Expect = 4e-31 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 34747 AATCATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTAT 34806 || |||| ||||| | | ||||||||||||||||| ||| ||| ||||| ||||| | Sbjct 145631 AAACATTACCTCCTCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGT 145690 Query 34807 AGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGT 34866 ||||||| | | ||| |||| |||| |||||| ||||| || || | || |||||| | Sbjct 145691 AGTCCGACAAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGAT 145750 Query 34867 CTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGG 34926 || | || | ||||| ||||| ||| ||| ||| || | | || | ||| || Sbjct 145751 CTGGTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGG 145810 Query 34927 CCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || | ||||||||||| |||||||| || || || ||||||||||| Sbjct 145811 CTTCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 145865 >seq18898 Length=402 Score = 113 bits (124), Expect = 3e-20 Identities = 159/222 (72%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||| || || ||||| ||||| | || |||| ||| Sbjct 95 ACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCTTCC 154 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || ||||| || || |||||||| | || | ||||||||||| Sbjct 155 AGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGG 214 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | || | ||| ||| || || |||| ||| || || ||| Sbjct 215 ATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTCTTT 274 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAGACTTG 34994 ||||| || ||||||||||| || ||||| || | || |||| Sbjct 275 CCCGTTAGGGTCTTCACAAAAATTTGCAT-TTTGGAGTCTTG 315 >seq55175 Length=171662 Score = 111 bits (122), Expect = 1e-19 Identities = 325/499 (65%), Gaps = 4/499 (1%) Strand=Plus/Minus Query 6044 GGATTAGCACCCTTTCCACCCGGAAACTCCCAGTCAATGTCCACTCCGTCAAAGAACTTC 6103 || ||||| ||||| || || || || ||||| || ||||| || || || ||||||||| Sbjct 39577 GGGTTAGCTCCCTTACCGCCAGGGAATTCCCAATCGATGTCAACACCATCGAAGAACTTC 39518 Query 6104 CATGTCTCCAGAAACTCGCGGACACTTGTGACGAACACCTTACGTTTGGAGTCATCGTTC 6163 || || | || || || ||| ||||| | || || | || | Sbjct 39517 CAGGTTTGAAGGAAATCTTTCACAGAATCAACGAAGCGGTCCCGCTTCACTTTGTCAGTG 39458 Query 6164 ATAAAATAAAACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACTGTCAACGAA 6223 | ||| | || ||||| | ||||| ||||| ||||| ||||||| | | | Sbjct 39457 AAAAAGAAGAAAGGATCAGCAAGAGTCCAGCCCCCAATGGAAGGTAGGATTTTAAGGTCC 39398 Query 6224 GGGTTGTGACGTTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACGCTTCGTTGTAC 6283 || | |||| | || ||||||||| ||||| || || ||||| | ||| || | Sbjct 39397 GGCCTAGCTTGTTTAAGGGACATCAGCTGACCAAAATTGCCTTTGTAAGGTTCATTCCAA 39338 Query 6284 GCCTCAACGCCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTCACCTTG 6343 | | ||| |||||||| ||||| | || ||||| |||||||| |||||| Sbjct 39337 GAAGACAAGCCCTTCTGTGGCTTTTGAAGAGCAGCCCAAGGATCGTGAATGGAAACCTTG 39278 Query 6344 AAGTCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCT 6401 || || || || ||| ||| || ||| || || | ||| | || | || | || Sbjct 39277 AAATCTTCACGGCCACTGCATGAACGCTGAAGAGCTTGAAAACTGCCTTCG--ATTTCCT 39220 Query 6402 TGAGGGCGTCGTTTATGCCGTTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCG 6461 | | ||| || ||||| | || |||||||||||||| || || |||| || || | Sbjct 39219 TTAAACTGTCATTGATGCCATCGCCTCCACAAATTGGAATAAAACCATACAAAAGATGAG 39160 Query 6462 TCAGATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCA 6521 |||||||||| ||||||| || | || || | || || || ||||| |||| Sbjct 39159 TCAGATTAGGAATTGGTATACGATCGACTGGGAATTTTCGTGGGTAAACACCCCATTCCA 39100 Query 6522 CGAAATACGCACCGACGAC 6540 |||| || || || || || Sbjct 39099 CGAAGTAAGCTCCAACAAC 39081 >seq32636 Length=346 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||| || ||| | || |||| ||||| ||||| || || || Sbjct 286 TCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAG 227 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | || |||||||| |||||| || || || Sbjct 226 ATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTTAC--AT 169 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | || | ||| || || | ||| |||||||| || ||||| ||||||| Sbjct 168 TCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATGGTTTTACCAGTGAGGGTCTTCA 109 Query 34969 CAAAGATCTGCAT 34981 | ||||| ||||| Sbjct 108 CGAAGATTTGCAT 96 >seq33159 Length=163697 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| || || | ||| |||| || Sbjct 97912 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGTCCATCTTCT 97853 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || | | ||||||||| | || | ||||||||||| | Sbjct 97852 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 97793 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || || || | | || | ||| | |||||| || | || |||||||| Sbjct 97792 ATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTTTTA 97733 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || || ||||||||||||||| Sbjct 97732 CCAGTCAGTGTTTTTACAAAGATCTGCATA 97703 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| ||||| || || | || |||| ||| Sbjct 97000 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTACGACCATCCTCC 96941 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| ||||| || || | | ||||||||| | || | ||||||||||| Sbjct 96940 AGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 96881 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| || | | || | || | ||| || || | ||| || || || Sbjct 96880 ATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGTGATAGTCTTG 96821 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || | ||||||||||| |||||||| || Sbjct 96820 CCGGTCAATGTCTTCACAAAAATCTGCATCTT 96789 >seq21507 Length=372 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| || || ||||| || || | || | || || |||||||| || ||||| Sbjct 212 TCTTTCTGGATATTGTAGTCTGAGAGTGTGCGGCCGTCTTCTAGCTGTTTACCCGCAAAG 153 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 |||| | |||||| ||| | || | ||||||||||| || || ||| || | Sbjct 152 ATTAACCTTTGCTGATCTGGGGGGATTCCCTCCTTGTCTTGGATTTTGGCTTTCACATTT 93 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || |||||| || | || ||||| || |||||||| ||||| || Sbjct 92 TCGATGGTATCGGAGGGCTCAACCTCTAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACG 33 Query 34971 AAGATCTGCATATT 34984 || |||||||| || Sbjct 32 AAAATCTGCATCTT 19 >seq36087 Length=321 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||| || || | ||| || ||||| || || ||||| || || | || || Sbjct 213 CTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGACCA 154 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || |||||||| || || || || ||||| |||||||| | || | ||||||||| Sbjct 153 TCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTG 94 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || || || || || | | || | ||| | ||| || || | || ||| Sbjct 93 TCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACTTCCAACGTGATG 34 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGC 34979 || || ||||| || || ||||||||||||||| Sbjct 33 GTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324394352138160