Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq55175 266 3e-66 seq33159 167 2e-36 seq27463 141 7e-29 seq18898 132 4e-26 seq33871 120 2e-22 seq36087 118 8e-22 seq410 89.7 4e-13 seq32636 87.8 1e-12 >seq55175 Length=171662 Score = 266 bits (294), Expect = 3e-66 Identities = 647/966 (67%), Gaps = 17/966 (2%) Strand=Plus/Minus Query 42471 CTATAGTCTACGACGCCATCTTCCCAAGTACCCGAAACTGGACCTGTCGCAATACCCGTG 42530 || || || || || ||||| | ||| ||||| ||||| ||||| || | || ||| Sbjct 40045 CTGTAATCAACAACACCATCCTGCCATGTACCTTTTACTGGTCCTGTGGCGTTGCCAGTG 39986 Query 42531 AAGGGATTATTGTTTTGGTAATTGCTTACTCCGGTCCAACCTCGTCCGTACATGGCCACG 42590 || ||||| || || ||| | ||| || ||||| || ||||||||||| || || Sbjct 39985 AATGGATTGTTACCTTCATAACCGTGTACACCAGTCCAGCCGCGTCCGTACATAGCTACA 39926 Query 42591 CCTAAAATTATTTTTTGAGGTTTCACTTTTTGTTTCAA--AAGCGTTTGAACGGCATAAT 42648 |||| | || || | ||| ||||| ||| ||| || ||| ||| || ||| Sbjct 39925 CCTACCACAATCTTCTTAGGGTTCACACCTTGAG-CAAGTAAATATTT-AACACCAAAAT 39868 Query 42649 CTGCCGTGTAATGTTCGTTTTCGTTCCATTCGGGAGCATACAGATTTGTTTGATGGCCCA 42708 | | || ||| ||| || |||||| | || ||||| || || ||||| || | Sbjct 39867 CAGTGGTATAAGTTTCTTTGGGATTCCATGCAGGGGCATATAGGGGAGTCTGATGACCGA 39808 Query 42709 AATCTGAATTTGACCAAGCACCTTTAAAGTCATAGCTCATTAAAAATATTTTATCCAAAT 42768 || ||||| |||||||| ||||| || ||||| | || || | |||| || Sbjct 39807 GGGTGTCGTTGGACCAGGCACCTTTGAAGTCGTAACTCATGAGGAAGATGTGGTCCATAT 39748 Query 42769 AGTTTTGAGCATCGTTGTAATCGACAATAGCGATTTTGTCGTCTCCCGCACTAATTGCGC 42828 | ||||| || ||| ||||||| || | || || || ||| |||||||| || Sbjct 39747 ACTTTTGGGCTTCGCTGTAATCTACGACTTGAATCTTATCCCATCCAGCACTAATAGCTG 39688 Query 42829 TAGTCAATTCGTATTTGCGATTAGTTTCGTTTTCTAGTTCGTCCAGCATGTCGCGCAATT 42888 || | |||||||| | ||||| | || |||| | ||| |||||||| | Sbjct 39687 AGGTGAGCTCGTATTTCTTACCCGTTTCTTCGGAAAGCTCGTTTAACATTTCGCGCAACT 39628 Query 42889 CTCGTAACAAAACTACATACGTAAGAC--CGTCATTTTGAGGATCTCCAATTGTCGGA-T 42945 | | | || | | || || ||| || | ||| || || |||| ||||| | Sbjct 39627 C-CTT--CATTAGTTCA-ACATAA-ACTTCTCCATCTTTCGGGCTACCAAG-GTCGGGGT 39574 Query 42946 TAGCTCCTTTACCACCGGGAAATTCCCAATCAATATCGACGCCGTCAAAAAATTTCCAAG 43005 ||||||| ||||| || || ||||||||||| || || || || || || || ||||| | Sbjct 39573 TAGCTCCCTTACCGCCAGGGAATTCCCAATCGATGTCAACACCATCGAAGAACTTCCAGG 39514 Query 43006 TGAGCAAAAACTCACGTACTGAATCCACAAATATTTTACGCTTG--TTTGCATCGCTGAA 43063 | | | || || || ||||| || || | ||||| |||| || |||| Sbjct 39513 TTTGAAGGAAATCTTTCACAGAATCAACGAAGCGGTCCCGCTTCACTTTG--TCAGTGAA 39456 Query 43064 AAAATAAAACGGGTCGGACAATGTCCATCCACCTATCGAAGGTAACACTTTAAGATGAGG 43123 ||| | || || || | | ||||| || || || ||||||| | |||||| | || Sbjct 39455 AAAGAAGAAAGGATCAGCAAGAGTCCAGCCCCCAATGGAAGGTAGGATTTTAAGGTCCGG 39396 Query 43124 GTTAGCTTTTTTGGCTGCCATTAATTGACCAAAGTTGCCTTTGTACGGTTCATTCCACGA 43183 |||||| ||| | ||| | |||||||| ||||||||||| ||||||||||| || Sbjct 39395 CCTAGCTTGTTTAAGGGACATCAGCTGACCAAAATTGCCTTTGTAAGGTTCATTCCAAGA 39336 Query 43184 GGAAACACCTTTTTGTGGTTTCTGTATAGCCGCCCACGGATCGTGTATGGAAACTTTGAA 43243 || | || || ||||| || || | ||| ||||| |||||||| |||||||| ||||| Sbjct 39335 AGACAAGCCCTTCTGTGGCTTTTGAAGAGCAGCCCAAGGATCGTGAATGGAAACCTTGAA 39276 Query 43244 GTCGCTTCGACCCGCACAAGATTTTTGAAGAGCTTCAAAACTGCCAGGAATAGATTTTAA 43303 || || || || || |||||||||| ||||||||| || ||||| Sbjct 39275 ATCTTCACGGCCACTGCATGAACGCTGAAGAGCTTGAAAACTGCCTTCGATTTCCTTTAA 39216 Query 43304 ACTGTCATTAATGCCGTCACCGCCGCATATCGGAATAAATCCGTACAACAAATGAGACAA 43363 ||||||||| ||||| || || || || || |||||||| || ||||| | ||||| || Sbjct 39215 ACTGTCATTGATGCCATCGCCTCCACAAATTGGAATAAAACCATACAAAAGATGAGTCAG 39156 Query 43364 ATTGGGTAAAGGCACTTTGTTGACAGGAAATGAACGACCGTATACGCCCCATTCTACAAA 43423 ||| || | || | | ||| || ||| || ||| || |||||||| || || Sbjct 39155 ATTAGGAATTGGTATACGATCGACTGGGAATTTTCGTGGGTAAACACCCCATTCCACGAA 39096 Query 43424 ATAAGC 43429 ||||| Sbjct 39095 GTAAGC 39090 >seq33159 Length=163697 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| ||||| | || || ||||| |||||||||||||| |||||||| |||| Sbjct 97474 CCTCCTCTCAAACGGAGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAA 97415 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | |||||||| ||||| || | ||| || ||||| || ||| Sbjct 97414 AGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGA 97355 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| ||||||||||||||| ||| ||| | || | ||||| || | |||||| Sbjct 97354 ATGCCTTCCTTATCTTGAATTTTTGCTTTAACATTCTCAATGGTGTCTGATGGTTCCACC 97295 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || |||| ||||| ||||| |||||||| Sbjct 97294 TCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAACAAAAATCTGCAT 97248 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||||||||| | ||||| ||||| |||||||| || || |||||||| || | Sbjct 97248 TTCCTCCTCTTAAACGGAGGACTAAGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCTG 97189 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| ||||| || || || ||||| ||||| | ||| || || || | Sbjct 97188 ACAATGTACGTCCATCCTCCAACTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGG 97129 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| |||||||| || || || ||| |||| | ||||| || | ||| | Sbjct 97128 GAATGCCTTCCTTATCTTGGATCTTCGCCTTAACATTTTCAATTGTGTCGGAGGGTTCAA 97069 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | |||| || || || || || ||||| || || |||||||| Sbjct 97068 CTTCCAATGTGATGGTCTTCCCAGTCAAGGTTTTGACGAAAATCTGCAT 97020 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||||||||| || || || || ||||| || | || || | |||| || Sbjct 98140 ACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCT 98081 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| | ||| || || || ||||||||||| || || || Sbjct 98080 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 98021 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| | || | ||||| || | || ||||| ||||||| ||||| Sbjct 98020 ATTTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGTTTTA 97961 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || |||||||| || |||||||| Sbjct 97960 CCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || ||| | || || ||||||||||| || || || || ||||| || | | Sbjct 97018 CCTCCACGTAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAG 96959 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| || || || || || ||||| | ||| || || || ||| Sbjct 96958 AGTGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 96899 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || || || || ||| ||| |||| | ||||| || | ||||| Sbjct 96898 ATGCCCTCCTTGTCCTGGATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACC 96839 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || |||||||| || || || ||||| |||||||| Sbjct 96838 TCCAAGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 96792 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || |||||||| || || || || ||||| || | || || | |||| || Sbjct 97912 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGTCCATCTTCT 97853 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| | ||| || || || ||||| || || || |||||| Sbjct 97852 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 97793 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || ||| |||| | ||| ||||| | || ||||| | |||| ||||| Sbjct 97792 ATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTTTTA 97733 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||||||||||| |||||||| Sbjct 97732 CCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 >seq27463 Length=372575 Score = 141 bits (156), Expect = 7e-29 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 101237 ACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAA 101296 ||||| ||||||| | | ||||| || ||||| || ||||| || || || ||||| Sbjct 145633 ACATTACCTCCTCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAG 145692 Query 101297 TCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCG 101356 || | | ||| | |||| ||||| || || || || || ||||| | || ||||| Sbjct 145693 TCCGACAAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCT 145752 Query 101357 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTT 101416 || |||||||| ||||| ||||||||||| ||||||| |||| | ||||||||| | | Sbjct 145753 GGTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCT 145812 Query 101417 TCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTA 101474 || || || | || | ||||| || || | ||||| || || |||||||| |||| Sbjct 145813 TCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCATTGTTA 145870 >seq18898 Length=402 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||||| || || |||||||||||||| || || |||||||| |||| | ||| | | Sbjct 88 ACGTAGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACC 147 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| ||||| || || ||||||| |||||| || || || ||||| || || || Sbjct 148 ATCTTCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTT 207 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || || ||| |||| | ||||||||| | ||| || || || |||| Sbjct 208 GTCTTGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGAT 267 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || |||| || || ||||| || ||||| Sbjct 268 TGTCTTTCCCGTTAGGGTCTTCACAAAAATTTGCAT 303 >seq33871 Length=3159 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||||||||| || || || || ||||| || | || || | |||| || Sbjct 2917 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCT 2976 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| | ||| || || || ||||||||||| || || || Sbjct 2977 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 3036 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| | || | ||||| || | ||||||||| | |||| |||||| Sbjct 3037 ATTTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGGTTTTG 3096 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || |||| ||||| || || |||||||| Sbjct 3097 CCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq36087 Length=321 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||||||||| || || || || || || |||||||| || | || ||| | |||| Sbjct 210 AAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGACCATCC 151 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | || ||||| || || || | ||||| || || || || ||||| || || ||| Sbjct 150 TCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 91 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || ||||| || ||| |||| | ||||||||| | |||||||| | |||| || Sbjct 90 TGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACTTCCAACGTGATGGTC 31 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGC 101467 ||||| || | ||||| ||||| |||||| Sbjct 30 TTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 >seq410 Length=311 Score = 89.7 bits (98), Expect = 4e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 101348 TGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTG 101407 || ||||| || |||||||| ||||| ||||||||||| ||||| | |||| | |||| Sbjct 3 TGCTGATCTGGTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTAAATTTTCGATAGTG 62 Query 101408 TCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGC 101467 ||||| | ||| || || | || | ||||| || || | ||||| || || |||||| Sbjct 63 TCAGAGGCTTCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGC 122 Query 101468 ATGGTTA 101474 || |||| Sbjct 123 ATTGTTA 129 >seq32636 Length=346 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || || || |||| | || | |||| |||| ||| Sbjct 298 TGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATCTTCCAGTTGT 239 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| |||||| || || || ||||||||||| || || || || || Sbjct 238 TTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTC 179 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 |||||| | || | ||||| || | |||||||| | |||| ||||| || || Sbjct 178 GCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATGGTTTTACCAGTG 119 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 118 AGGGTCTTCACGAAGATTTGCAT 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395986351487790