Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq34861 235 3e-57 >seq34861 Length=230841 Score = 235 bits (260), Expect = 3e-57 Identities = 310/430 (72%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||||||||| |||||||| | ||||||||||| ||||| ||||| | |||||||| Sbjct 61616 CATAAATAAATCAGGAATCCATAAAGCATAAAATAATTCTCTTGCTCTTACCTCTTCTTT 61675 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||||||||| |||||||| || ||||||| ||| || ||||| |||||||| || Sbjct 61676 ACCAGTATTCTTTTTCAGATCTAAAAACTCAAAAACATCAGAATGCCAAGGTTCTAAGTA 61735 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || || ||| ||| || ||| || ||||| || || || || || || | ||| Sbjct 61736 AATTGCGAAAGCCCCTGGTCGTTTATTGCCTCCTTGGTCAACATACCTAGCTGTATTATT 61795 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 | | ||| |||||||||| || | ||| | |||| |||||| || | | || | || Sbjct 61796 GTACACTCTCAACATTGGTACAAGACCATTGGAAACTCCGTTAGTACCAGCTATGTAGGT 61855 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 ||| | ||||| ||| ||| |||| | || || |||||||| |||| ||||| Sbjct 61856 ACCTTTTGATCTGATACAATGAACATGTACTCCAATACCACCAGCTGATTTGGAAATTAA 61915 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 |||||| | | | ||| || | || |||| ||||||||| |||||||| ||| | Sbjct 61916 TGCACATTGTTTTAATGTGTCATATATACCTTCAATGCTATCATCTTTCATTGCTATGAG 61975 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 || |||||||||||||||| | ||| ||| | || ||||| || | ||||| Sbjct 61976 GAAGCAAGAAGATAATTGCGGTCTTGGAGTTGCTGCAGAGAACAATGTGGGACTTGCATG 62035 Query 26353 AGTATAATAT 26362 ||| ||||| Sbjct 62036 AGTGAAATAT 62045 Score = 116 bits (128), Expect = 2e-21 Identities = 120/155 (77%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAGTGAATGGTTCAAAACAT 25072 |||||||||||| ||||| | ||| ||| ||| |||||| || ||||||||||| || Sbjct 60731 AAATTCTCCAGATAAAACACGTCT--TTGGTAAATGTTTGATGTAAATGGTTCAAATGAT 60788 Query 25073 TCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAA 25132 ||||||||||| |||||||| | |||||||| || |||||| |||| ||| || ||| Sbjct 60789 TCATTATTTCCCAAGATTTGTGCTGTAGATGCCGTGGGCATTGGGGCTAATAAAAGTGAA 60848 Query 25133 TTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167 || | | |||||||| |||| | || ||||| Sbjct 60849 TTGCGAAGTCCATATTTGGCAATTTTTTCCTTTAA 60883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252853515055250