Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq34861 136 5e-27 seq39759 82.4 9e-11 >seq34861 Length=230841 Score = 136 bits (150), Expect = 5e-27 Identities = 884/1401 (63%), Gaps = 34/1401 (2%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| | ||| | ||||| ||| | ||||| ||||| || |||||||||||| Sbjct 62140 GAAAGACCACAGCATATGCTAATGCGAGTCTCTATCGGGATCCATGGTGAAGACATTGAT 62081 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAAC 75324 | | | | || || ||| || | |||| || ||| |||| ||| |||| || || Sbjct 62080 GCAGCCATAGAAACCTACAACTTGTTGTCGGAAAAATAT-TTCACTCATGCAAGTCCCAC 62022 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 | ||| ||| | || ||||||||||| | || ||||||||| || || | || Sbjct 62021 ATTGTTCTCTGCAGCAACTCCAAGACCGCAATTATCTTCTTGCTTCCTCATAGCAATGAA 61962 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 || || || | ||||| |||| || | | | ||||| ||| || || | Sbjct 61961 AGATGATAGCATTGAAGGTATATATGACACATTAAAACAATGTGCATTAATTTCCAAATC 61902 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| |||||||| | || | ||| | | ||| | || | || || Sbjct 61901 AGCTGGTGGTATTGGAGTACATGTTCATTGTATCAGATCAAAAGGTACCTACATAGCTGG 61842 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || || || ||||| || | |||||| | | || | || ||||| | Sbjct 61841 TACTAACGGAGTTTCCAATGGTCTTGTACCAATGTTGAGAGTGTACAATAATACAGCTAG 61782 Query 75565 CTATGTAAATCAAGCGGGGCGT---CG-CAAGGGGTCCATCGCGGTCTACTTGGAACCAT 75620 ||||| | |||| || | || | ||||| | |||| | ||||| ||||| | Sbjct 61781 GTATGTTGACCAAGGAGGCAATAAACGACCAGGGG-CTTTCGCAATTTACTTAGAACCTT 61723 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAA----GGTGACGAAGAG 75676 ||||| | ||| | | ||||| || || | || || || ||| | |||||| Sbjct 61722 GGCATTCTGATGTTTTTGAGTT--TTTAGATCTGAA--AAAGAATACTGGTAAAGAAGAG 61667 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 | | ||||| | |||| | | |||||||| || | || ||||| || ||| Sbjct 61666 GTAAGAGCAAGAGAATTATTTTATGCTTTATGGATTCCTGATTTATTTATGAACCGTGTT 61607 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 || | | || ||| | | | || || || | || ||||| ||||| Sbjct 61606 GAAAAAGATGAAATGTGGAGTTTAATGTGCCCTCACGATTGCCCTGGTCTTGCCGACTGT 61547 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 ||| || || |||||| | | || ||| || ||| |||| || | | | Sbjct 61546 TGGGGAGAAGAATTTGAAACATTATATGAAAAATACGAACAGGAAAAGAGGTTCGTTAAG 61487 Query 75857 ACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 || | ||| || | |||||||| || | | |||| || || || ||| Sbjct 61486 CAAGTTCGAGCTCAAGAACTGTGGAAGGCAATAATAGAGGCACAAGTCGAAACAGGCACA 61427 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 ||||| ||||| ||||| ||| | ||||| | || ||||| ||||| ||| | || || Sbjct 61426 CCATACATGCTGTACAAAGATTCATGTAATAGAAAAAGTAATCAAAAAAATCTTGGCACC 61367 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG--GATGAGACGG 76034 || || || ||| | || || |||||| | || || || | || ||||| | Sbjct 61366 ATTAAATGCAGTAATTTGTGTACTGAAATTGTTGAATATACT--TCAGCAGATGAAGTTG 61309 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAG-TATGTCAATGAAGAGACTCGCACT 76093 | || || || ||||| ||||| || || | || | ||| |||||||| | || Sbjct 61308 CAGTCTGTAACTTGGCTTCAATTGCG-TTAAATAGATTTGTTAATGAAGATAAA---ACA 61253 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | | ||| | |||| | | ||| |||| |||| | || | |||||||| | || Sbjct 61252 TATAATTTTACAAAATTGAAAGAAGTCACGAAGACAATAACACAGAATCTAAATAAAATC 61193 Query 76154 ATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212 ||||| || | || || || ||| || || ||||| |||||||||||||| Sbjct 61192 ATTGATGTTAACTACTACCCAGTGCCAGAA-GCAAAGAATTCTAACATGCGACACAGACC 61134 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTG 76271 || ||| | || || |||||| | || ||| |||| | || ||| | | ||| || Sbjct 61133 GATAGGTATTGGAGTGCAAGGTTTAGCCGATACATTTGTACTTATGCGCATTC-CATATG 61075 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | || || || | | | || | ||||||||||| || || ||| | | Sbjct 61074 AAAGTGAAGACGCAATTAAACTTAACCAACAAATCTTTGAAACAATATACTACGGAGCAT 61015 Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391 | || || ||||| ||| | || ||| || || ||| || | ||| || || Sbjct 61014 TAGAAGCCAGTTGCGAACTCGCGGAAAAACATGGAGTTTATAGTACTTATGAAGGAAGTC 60955 Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC-CAAGCTCAACTAC 76450 | || ||| || | | || | |||||||||||| | |||| | | || | || Sbjct 60954 CGGCAAGCCAGGGCATCTTGCAATATGATATGTGGGA---TAAAACTCCAACTGATCTGT 60898 Query 76451 G--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508 | ||||| |||| | |||||| || | | || ||||| || ||||| Sbjct 60897 GGGACTGGACTGTTTTAAAGGAAAAAATTGCCAAATATGGACTTCGCAATTCACTTTTAT 60838 Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568 | || |||||||| || || || || |||||||||||||| |||||||||| ||||||| Sbjct 60837 TAGCCCCAATGCCCACGGCATCTACAGCACAAATCTTGGGAAATAATGAATCATTTGAAC 60778 Query 76569 CATACACAACAAACATCTACC 76589 ||| ||| ||||||| |||| Sbjct 60777 CATTTACATCAAACATTTACC 60757 >seq39759 Length=128263 Score = 82.4 bits (90), Expect = 9e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 64987 TTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAA 65046 ||||| | || || ||||| |||||||| | |||| ||||| | |||||| || || Sbjct 67112 TTATTCAATGCAATTGAAACTTTACCATGTGTAAAGAAAAAGGCAGACTGGGCACTGCAA 67171 Query 65047 TGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAG 65106 ||| ||| || || || ||| | || || | |||| ||||| ||| || Sbjct 67172 TGGATTGGCAGTAAAACTGCAAACTTTGGGGAACGGATAGTTGCCTTTGCAGCTGTAGAA 67231 Query 65107 GGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATG 65166 || |||||||| ||||| || | | || | ||||||||||||||||| | ||| Sbjct 67232 GGAATCTTCTTTTCCGGAAGCTTTGCCTCAATATTCTGGTTGAAGAAGCGGGGCTTGATG 67291 Query 65167 CCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGG 65209 || || || ||| ||||| || ||||| ||||||||| Sbjct 67292 CCCGGTCTGACTTTCAGCAATGAGCTAATTTCTAGAGATGAGG 67334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596118667953600