Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq34861 188 2e-42 seq33282 136 1e-26 seq36549 107 6e-18 seq49859 105 2e-17 >seq34861 Length=230841 Score = 188 bits (208), Expect = 2e-42 Identities = 629/966 (65%), Gaps = 17/966 (2%) Strand=Plus/Plus Query 155399 AAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCT 155458 |||||| ||||||||||| || ||||||||||| | || | || | | | | | Sbjct 61097 AAATGTATCGGCTAAACCTTGCACTCCAATACCTATCGGTCTGTGTC-GCATGTTAGAAT 61155 Query 155459 GCTTGTCTTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATT-TGTAACC 155516 ||| ||||| | |||||| | || |||||||| || ||||||| ||| ||| Sbjct 61156 TCTTTGCTTCTGGCACTGGGTAGTAGTTAACATCAATGATTTTATTTAGATTCTGTGTT- 61214 Query 155517 AATACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAAC 155576 | | ||| || || ||| ||||| | | | | |||||||||| ||||| ||||| Sbjct 61215 ATTGTCTTCGTGACTTCTTTCAATTTTGTAAAATTATATGTTTTATCTTCATTAACAAAT 61274 Query 155577 ATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTC 155635 || | |||| || |||| ||||| || ||| || | || | | | ||||| Sbjct 61275 CTATTTAACGCAATTGAAGCCAAGTTACAGACTGCAACTTCATCTGCTGAAG-TATATTC 61333 Query 155636 TACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTT 155695 ||||| ||| |||| ||| | || |||||||| | ||| || || ||| ||| Sbjct 61334 AACAATTTCAGTACACAAATTACTGCATTTAATGGTGCCAAGATTTTTTTGATTACTTTT 61393 Query 155696 ACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAG 155755 || ||||| | ||| ||||| || |||||||| || ||||| || | ||||| || | Sbjct 61394 TCTATTACATGAATCTTTGTACAGCATGTATGGTGTGCCTGTTTCGACTTGTGCCTCTAT 61453 Query 155756 AAT--CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCA 155813 || | || ||| || || | || || |||||| | | || |||| || Sbjct 61454 TATTGCCTT--CCACAGTTCTTGAGCTCGAACTTGCTTAACGAACCTCTTTTCCTGTTCG 61511 Query 155814 TATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTA 155873 ||||| ||| | ||| | || || || |||| || || |||||||| | Sbjct 61512 TATTTTTCATATAATGTTTCAAATTCTTCTCCCCAACAGTCGGCAAGACCAGGGCAATCG 61571 Query 155874 TCGGGGCAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCAC 155931 | ||||| | | ||| |||| || | || ||||| | |||||||| |||| Sbjct 61572 TGAGGGCACATTAAACTCCACATTTCAT--CTTTTTCAACACGGTTCATAAATAAATCAG 61629 Query 155932 TCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCC 155991 ||| | |||||| || | || ||||| || ||| || | || |||||| Sbjct 61630 GAATCCATAAAGCATAAAATAATTCTCTTGCTCTTACCTCTTCTTTACCAGTATTCTTTT 61689 Query 155992 GTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTAC 156051 || ||||| || || || ||||| ||| || || | || || || ||| | Sbjct 61690 TCAGATCTAAAAACTCAAAAACATCAGAATGCCAAGGTTCTAAGTAAATTGCGAAAGCCC 61749 Query 156052 CATTCC---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCA 156108 | | | ||||| || || || ||||||| ||| || |||||| | || | | || Sbjct 61750 CTGGTCGTTTATTGCCTCCTTGGTCAACATACCTAGCTGTATTATTGTACACTCTCAACA 61809 Query 156109 TAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA 156168 | || | || |||||||||| || || || || || | | ||| ||| | | Sbjct 61810 TTGGTACAAGACCATTGGAAACTCCGTTAGTACCAGCTATGTAGGTACCTTTTGATCTGA 61869 Query 156169 CATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTA 156228 | ||||| ||||| |||||||||||| | |||| |||||| || |||| |||| Sbjct 61870 TACAATGAACATGTACTCCAATACCACCAGCTGATTTGGAAATTAATGCACATTGTTTTA 61929 Query 156229 CAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA 156288 || | | ||||||||||| |||||||| ||||| || || |||| ||| || Sbjct 61930 ATGTGTCATATATACCTTCAATGCTATCATCTTTCATTGCTATGAGGAAGCAAGAAGATA 61989 Query 156289 ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTAT 156348 |||| |||| ||| ||| | || ||| | ||| || |||||||| | ||||| || | Sbjct 61990 ATTGCGGTCTTGGAGTTGCTGCAGAGAACAATGTGGGACTTGCATGAGTGAAATATTTTT 62049 Query 156349 TAGACA 156354 |||| Sbjct 62050 CCGACA 62055 >seq33282 Length=207621 Score = 136 bits (150), Expect = 1e-26 Identities = 309/455 (68%), Gaps = 20/455 (4%) Strand=Plus/Plus Query 288896 CTCTGTTTGTTGCTGCCAATACAACAATAGATTCG--GTTTGCTTAAATCCATCCATACT 288953 |||||||||||||||||| || |||| | |||| ||| ||||| || ||||| | Sbjct 178498 CTCTGTTTGTTGCTGCCAGCACCACAACA--TTCGTAGTTGTGTTAAACCCGTCCAT--T 178553 Query 288954 TGTTAAA--ATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCC 289011 | || | |||||||| || | ||| |||| || | ||| ||| || Sbjct 178554 TCCACAAGGAGCTGATTAAGAGTGTTTTCTTGTTCAGAATGTCCACCAA---AATTACG- 178609 Query 289012 GAATCGCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG 289069 || ||||| | || ||||||||||||||||||||||||| || | | ||| || | Sbjct 178610 ---TC-CTCCTCTCTTCCTACCAACAGCATCAATTTCGTCAATAAAGAGAATACAAGGGG 178665 Query 289070 AATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACA 289129 || || | || |||| ||| | || | ||| | || | || | ||||||| ||| Sbjct 178666 CATGTTTACGTGCCATTGAAAACATATCACGTACTCTCGAAGGACCTACACCAACAAACA 178725 Query 289130 TTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTG 289189 |||| | |||||||||| | || ||| |||||||| ||||| ||||| |||||| || Sbjct 178726 TTTCCAAAAATTCAGAACCTGAGACTGTAATGAATGGCACATTAGCTTCTCCTGCTGTTG 178785 Query 289190 CCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTA 289249 | | ||||| | ||| || || || ||||| || ||| | | | |||||||| | Sbjct 178786 CTTTAGCCAGTAATGTTTTTCCAGTACCAGGAGGGCCCGTGAGCAAGGCACCCTTTGGAA 178845 Query 289250 CTTTTGCCCCAGCAGAC-TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCA 289308 ||| || || || | | || | || ||| | |||| || | |||| ||| | Sbjct 178846 TTTTCGCTCC-TAAGTCAATGTACTGCTGAGGATTTTTTAGGAAATTGACAAACTCCATA 178904 Query 289309 AGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | |||| |||||| || ||||| || || ||||| Sbjct 178905 ATTTCAATTTTTGCTTCTTCACAACCAGCAACATC 178939 >seq36549 Length=56599 Score = 107 bits (118), Expect = 6e-18 Identities = 202/295 (68%), Gaps = 8/295 (3%) Strand=Plus/Minus Query 251422 TTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGA 251481 || || ||||| | || |||| ||||||| | ||| | | ||| | | ||| || Sbjct 15189 TTGCAAACATGTATGCGATAAGGATCAGATACTTCAAACAACCGCTCTCTAAGGAACTGA 15130 Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 | || ||||||| ||| |||||| |||||||| || |||||||| | |||||||||| Sbjct 15129 GCCGCGCCGTGTGCAATTTGACAATCGCGCTCCATCTCTCCGAAACGTAAACCACCATCG 15070 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTA 251601 ||||| || ||||| |||||| | | | | || ||| || || | | | Sbjct 15069 CGAGCTCTGCCCTCCATAGGCTGTCTTACCAAAATTTGCACAGGCCCTCGGGCTCTGGAA 15010 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661 || ||||||| |||||| |||||||| || ||||| ||| |||||| | ||| | Sbjct 15009 TGGATTTTATCATCTACCATGTGCTTGAGGCGTTGGTAATATGTGGGACCTAAGAAAA-- 14952 Query 251662 CTCGAAGGCATTTGCTCT----CCAGTTAGAGCGTTATACATAACTTCGTTTCCA 251712 || || |||||| | | || || || | || ||||||||||| || ||| Sbjct 14951 CTTGA--GCATTTATTTTGCGGCCTGTGTGACCATTGTACATAACTTCATTGCCA 14899 >seq49859 Length=327338 Score = 105 bits (116), Expect = 2e-17 Identities = 187/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || |||||||| |||||||| |||||| || ||||||||||| ||| Sbjct 71431 TCCATAGCCTTTATCAAACGACGTTGAATATATCCAGTTTCAGCGGTTTTTACAGCAGTA 71372 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 ||||| ||||| |||||||||||||||| || || | | |||| || ||| | || Sbjct 71371 TCAATAAGACCTTCACGACCACCCATAGCGTGAAAATAGAACTCTGATGG-CGTCAAACC 71313 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 ||| | | || | || || || || | | || || || ||| || |||| Sbjct 71312 GGCAAGATATGAATTTTCTACAAAGCCTCTAGATTCAGGACCATAATCGTCTTTAATAAA 71253 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 |||||||| || | || | |||| |||| ||||| || || || ||||| || || Sbjct 71252 GTGTGGCAATGTTCGCTTTCGAAAGCCAAATGGTATACGTTTACCTTCTACGTTTTGTTG 71193 Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATT 302843 || | || | ||| | || || ||||| Sbjct 71192 GCCTACACAAGCAATAACTTGAGATATATT 71163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470677277118390