Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq55175 210 2e-49 seq28822 197 1e-45 seq27267 100 2e-16 seq26923 100 2e-16 seq33159 84.2 2e-11 seq21507 82.4 6e-11 seq10121 82.4 6e-11 >seq55175 Length=171662 Score = 210 bits (232), Expect = 2e-49 Identities = 603/914 (66%), Gaps = 25/914 (3%) Strand=Plus/Plus Query 28881 CATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGGGCTCAACGACGCCCTTAAA 28940 ||||| || || || || | || ||||| || ||||| || |||| ||| || || Sbjct 39162 CATCTTTTGTATGGTTTTATTCCAATTTGTGGAGGCGATGGCATCAATGACAG--TTTAA 39219 Query 28941 ACCATACCC--GGTAGTTTTGAAGCGCTGCAACGTTCGTGCAACGGCCGTTCAGATTTTA 28998 | | | | || |||||| |||| || || ||||| |||| |||||| |||||| | Sbjct 39220 AGGAAATCGAAGGCAGTTTTCAAGCTCTTCAGCGTTCATGCAGTGGCCGTGAAGATTTCA 39279 Query 28999 AAGTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCAAAAGGGCGTGTCTGCGT 29058 | ||| | ||||||||||||||||| || | ||||| || || |||||| ||||| | | Sbjct 39280 AGGTTTCCATTCACGATCCTTGGGCTGCTCTTCAAAAGCCACAGAAGGGCTTGTCTTCTT 39339 Query 29059 GGAACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATGGCTGCCAAGTTGGCCAATCCAC 29118 |||| || || |||||||||||||| |||||||| ||| | || || | || Sbjct 39340 GGAATGAACCTTACAAAGGCAATTTTGGTCAGCTGATGTCCCTTAAACAAGCTAGGCCGG 39399 Query 29119 ACATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGACCCTTTTTATTTTATGC 29178 || | ||||| ||||| ||||| || |||||||| | | || ||||| | | || | | Sbjct 39400 ACCTTAAAATCCTACCTTCCATTGGGGGCTGGACTCTTGCTGATCCTTTCT-TCTTTTTC 39458 Query 29179 AC-GACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGTCGAGGAATTTTTGCAGGTGTGG 29237 || ||| | ||| ||| | || || || || || | || || | || ||| Sbjct 39459 ACTGACAAAGTGAAGCGGGACCGCTTCGTTGATTCTGTGAAAGATTTCCTTCAAACCTGG 39518 Query 29238 AAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCGGTAAAGGCGCTAA-CCC 29296 || || || || || || ||||| || |||||||| || |||||||| || ||||| ||| Sbjct 39519 AAGTTCTTCGATGGTGTTGACATCGATTGGGAATTCCCTGGCGGTAAGGGAGCTAACCCC 39578 Query 29297 GACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACAT--TTTACTGAAGGAATTG 29354 ||| ||||| | | | | || | || | || || | || ||||||| ||| Sbjct 39579 GAC-CTTGGTAGCCCGAA---AGATG--GAGAAGTTTATGTTGAACTAATGAAGGAGTTG 39632 Query 29355 CGCGCAATGCTGGATAAACTGCAATTGC----AAACGGGTAAAACGTATGAATTGACAAG 29410 |||| ||| | ||||| || | |||||||||| | || || | || Sbjct 39633 CGCGAAAT----GTTAAACGAGCTTTCCGAAGAAACGGGTAAGAAATACGAGCTCACCTC 39688 Query 29411 CGCAATCAGCTCTGGCCACGACAAAATTGCTGTAGTGAAATACGACGTTGTGCAAAAATT 29470 || || || |||| || || ||| || || | ||| || | ||||| | Sbjct 39689 AGCTATTAGTGCTGGATGGGATAAGATTCAAGTCGTAGATTACAGCGAAGCCCAAAAGTA 39748 Query 29471 TCTTGATAAAATATTTCTAATGAGTTACGATTTTAAAGGCGCATGGTCAAACACCGATTT 29530 | | || | || || || ||||||||||| || ||||| || ||||| ||| | | Sbjct 39749 TATGGACCACATCTTCCTCATGAGTTACGACTTCAAAGGTGCCTGGTCCAACGACACCCT 39808 Query 29531 GGGATATCAAACTACACTCTACGCACCGAGTTGGAATCCCAACGAGCTTTACAACACTGA 29590 || |||| ||| | || || || || ||||||||||| || ||| | |||||| Sbjct 39809 CGGTCATCAGACTCCCCTATATGCCCCTGCATGGAATCCCAAAGAAACTTATACCACTGA 39868 Query 29591 CCACGCCGTAAAGTCGCTCACTAAC-CAAGGCGTGGACCCGCGCAAAATTATTGTGGGCG 29649 | || || | | ||| | ||||| ||| |||| || ||| | || || | Sbjct 39869 TTTTGGTGTTAAAT-ATTTACTTGCTCAAGGTGTGAACCCTAAGAAGATTGTGGTAGGTG 39927 Query 29650 TCGCCATGTACGGCCGCGGTTGGACGGGCGTGACCGGTTACGTCGGTGACAACTATTTTA 29709 | || |||||||| ||||| ||||| || || |||||| | ||| |||| || | Sbjct 39928 TAGCTATGTACGGACGCGGCTGGACTGGTGTACACGGTTATGAAGGTAACAATCCATTCA 39987 Query 29710 AAGGCACAGCTGCCGGGCCCGTGACCGGCACTTGGGATGACGGAGTTGTCGACTATCGTC 29769 |||| || | || || || | || || ||| | || || ||||| || || | Sbjct 39988 CTGGCAACGCCACAGGACCAGTAAAAGGTACATGGCAGGATGGTGTTGTTGATTACAGGG 40047 Query 29770 AAATaaaaaaaGAA 29783 ||||| ||| ||| Sbjct 40048 AAATAGCAAATGAA 40061 >seq28822 Length=296849 Score = 197 bits (218), Expect = 1e-45 Identities = 132/147 (90%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 || ||||||||||| | |||||||||||||| |||||||||||||||||||||||||| Sbjct 280671 CCCAGCGCCTTGGCCACCTCGGGCATGTTGACAATGACAGTCTTGATGCCGTTGCCCTTG 280612 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 || || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 280611 CCCTCCACCTTGGCGCAGATGCGCGGCATCTTGTAGCGGTAGAACGCGTCCGCCACGTTC 280552 Query 34621 CGGTTAACGTTCACAGTCCCCATCGTG 34647 ||||| ||||||| || |||||| ||| Sbjct 280551 CGGTTCACGTTCAAAGACCCCATGGTG 280525 Score = 170 bits (188), Expect = 2e-37 Identities = 138/167 (83%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 34201 GCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA 34260 || |||||||| ||||||||||||||||||||||| || ||| | |||| |||||| Sbjct 281253 GCGGGCGGGTTCTTCAGTATGAAGGTGTTGAGCTTGTGGTTGAACTCGAGCGCGCCGTGG 281194 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 || ||||| || ||||||||||| |||| | ||||| || | ||||||||| ||||| Sbjct 281193 TAGCCGCACGCCTTGCAGCCCTGCGAGATGCTATTCTTCTTCGTGGACACGATCAGCTCC 281134 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 |||||||||||||| || ||||| |||| |||||||||||| ||||| Sbjct 281133 GTCTCCGGGTTGTCGCACTCCGGGCACAGCACAAACTTGCGAATGAA 281087 Score = 111 bits (122), Expect = 1e-19 Identities = 139/192 (72%), Gaps = 9/192 (5%) Strand=Plus/Minus Query 33588 CACTTTGGGCAGCAGCGCCTGGTCCAAAACGCAcagcgcggtgagcgcg---------gc 33638 ||| ||||||||||| ||||| | |||| ||||||||||| ||| || Sbjct 283509 CACCTTGGGCAGCAGGTTCTGGTGAAGCGCGCAGAGCGCGGTGAGAGCGTTGAGCACGGC 283450 Query 33639 ccgctgcgcgcgcagatcgccgcgcgtaaactgcagcagcagcgcgcggtacttgcgcAC 33698 |||||||| ||| | ||||||||||| | |||||||||||| || | || ||| Sbjct 283449 GCGCTGCGCCCGCGGCTCGCCGCGCGTCAGACGCAGCAGCAGCGGCCGCTGTTTCTTCAC 283390 Query 33699 GTCCCCGGCGAACGCCGCCGGCCTCACCAGCACCTCGAACAGCACCAGCGGCGCCTTCGA 33758 ||| | | | || |||||| ||||||||||||||||| |||||||||||| ||| Sbjct 283389 GTCGGCCGACAGCGAGCCCGGCCGCACCAGCACCTCGAACACCACCAGCGGCGCTTTCTC 283330 Query 33759 CTTCACCTCCAG 33770 ||||||||| Sbjct 283329 ACGCACCTCCAG 283318 Score = 96.9 bits (106), Expect = 3e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || ||||||||||| | |||| | ||||| ||| |||||| || ||||| || ||| Sbjct 280902 CCGTCCAGCAGGTCCTGAAGCTTAGCAGAGTCATGGCTGCCGTTCACTATGAAACGCTCG 280843 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 || ||| | |||| ||| || ||||| ||||| || || || |||||||| || |||| Sbjct 280842 TTCTTGAAGTCGAACTGGGTCTGCGCTCCCAGTTCACAGCCAAAGTACTTGGTGGGGT 280785 >seq27267 Length=86652 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 107177 CACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGAA 107236 ||||||||||||||||||||||| ||||||| | ||||| || ||||||||||| | Sbjct 6884 CACGGCTTCCACGTGCACGAATTCGGCGACAATACAAACGGGTGCACGTCCGCCGGCGCT 6943 Query 107237 CACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAGAAAGGCACGTCGGC 107296 |||||||| |||| | || | |||||||| ||| |||| | | ||||| ||| Sbjct 6944 CACTTCAACCCCAACAAGCAGGAGCACGGTGCACCCACCGCCACCGTGCGCCACGTTGGC 7003 Query 107297 GATCTGGGCAACGTC 107311 || || |||||| || Sbjct 7004 GACCTCGGCAACATC 7018 >seq26923 Length=415599 Score = 100 bits (110), Expect = 2e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 103321 CAACGGGTTCTACTATTTGGGCCGCAGCGACGAGGTGCGCTGCGCGTTTTGCAAAGTGGA 103380 |||||| ||||| || | ||||| ||||||| || || ||||| ||||| ||||| || Sbjct 192578 CAACGGCTTCTATTACCTCGGCCGTGGCGACGAAGTTCGTTGCGCCTTTTGTAAAGTCGA 192637 Query 103381 AATCATGCGCTGGATGAATGGCGACGACCCGGAGAGCGACCATAAAAAGTGGGCGCCTCG 103440 ||||||||||||| | | ||||||||||| | || ||||| | ||||| || | Sbjct 192638 AATCATGCGCTGGGTCGAGGGCGACGACCCTGCGAAAGACCACCAGCGTTGGGCCCCACA 192697 Query 103441 ATGCCCGTTTTTG 103453 ||| ||||||||| Sbjct 192698 ATGTCCGTTTTTG 192710 >seq33159 Length=163697 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| ||||| |||| || || || || || | || ||| || Sbjct 97247 AATGCAGATTTTTGTTAAAACACTAACAGGGAAGACTATCACATTAGAGGTGGAACCATC 97306 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || ||| || ||| || || |||||| | ||| ||||| Sbjct 97307 AGACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGATCA 97366 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | ||||| | ||||||||| ||||| || |||| | ||| | | || ||||| Sbjct 97367 GCAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCCGACTACAA 97426 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||||||||||||||| | ||| ||||| Sbjct 97427 TATTCAAAAAGAATCTACACTTCACTTGGTG 97457 >seq21507 Length=372 Score = 82.4 bits (90), Expect = 6e-11 Identities = 163/240 (68%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 110260 TAAGAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGA 110319 |||| || | || ||||| || || ||||| || | || ||||| ||||| || | || Sbjct 10 TAAG-GAGTCAAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTAGA 68 Query 110320 AACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGT 110379 ||||| |||||| ||| | || ||| || || ||||| || || | Sbjct 69 GGTTGAGCCCTCCGATACCATCGAAAATGTGAAAGCCAAAATCCAAGACAAGGAGGGAAT 128 Query 110380 GCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAAT 110439 ||| ||||| ||||| | || | ||||||||||||||| || || | | | ||| | Sbjct 129 CCCCCCAGATCAGCAAAGGTTAATCTTTGCGGGTAAACAGCTAGAAGACGGCCGCACACT 188 Query 110440 GGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 | || ||||| || || ||||| ||||| | ||| ||||| | ||| |||| || || Sbjct 189 CTCAGACTACAATATCCAGAAAGAGTCTACCCTCCACCTGGTGCTCAGATTGCGCGGTGG 248 >seq10121 Length=1170 Score = 82.4 bits (90), Expect = 6e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 107177 CACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGAA 107236 ||||||||||||||||| ||||| ||||||| || ||||| || ||||||||||| | Sbjct 1087 CACGGCTTCCACGTGCATGAATTCGGCGACAACACGAACGGGTGCACGTCCGCCGGCGCT 1146 Query 107237 CACTTCAATCCCA 107249 |||||||| |||| Sbjct 1147 CACTTCAACCCCA 1159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412537344771710