Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq49147 86.0 1e-10 seq26358 86.0 1e-10 >seq49147 Length=452329 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 118350 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 118291 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 118290 CTCACCCGGGGCATATC 118274 >seq26358 Length=838686 Score = 86.0 bits (94), Expect = 1e-10 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 1812776 GTAGCGATGCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGA 1812835 || || | |||||||||||||||| ||| ||||| | || ||||| | ||||||||| Sbjct 758247 GTCGCAAGGCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGA 758188 Query 1812836 GTTCGATCCTCACCCGAGGTATATC 1812860 |||||||||||||||| || ||||| Sbjct 758187 GTTCGATCCTCACCCGGGGCATATC 758163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7909813930296330