Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq27463 134 9e-27 seq32636 125 5e-24 seq18898 116 2e-21 seq33159 113 3e-20 seq33871 111 1e-19 seq21507 104 2e-17 seq36087 100 2e-16 seq55175 98.7 6e-16 >seq27463 Length=372575 Score = 134 bits (148), Expect = 9e-27 Identities = 173/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 34743 AATCATTTCCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTA 34801 || |||| ||||| | | ||||| |||| ||||| || || | |||||||| ||||| Sbjct 145631 AAACATTACCTCCTCGAAGCCTCAAAACCAAGTGAAGTGTTGAT-TCCTTCTGGATGTTG 145689 Query 34802 TAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861 |||||||| | |||| |||| |||| || || ||||||||||||| || |||||| Sbjct 145690 TAGTCCGACAAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGA 145749 Query 34862 TCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTG 34921 ||| | || | ||||| ||||| | ||||| ||| || | | || | ||| | Sbjct 145750 TCTGGTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAG 145809 Query 34922 GCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || | |||||||| || ||||||||||| || || ||||||||||| Sbjct 145810 GCTTCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 145865 >seq32636 Length=346 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | |||| ||||||||| ||||||||||| || ||| |||| |||| Sbjct 308 CAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATC 249 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||||||| || || ||||||||||| || ||||||||| | || | || |||||||| Sbjct 248 TTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 189 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || || | || | ||| || || | ||| ||| Sbjct 188 CTGGATCTTCGCCTTTAC--ATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATG 131 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || ||||||||||| || ||||| ||||| Sbjct 130 GTTTTACCAGTGAGGGTCTTCACGAAGATTTGCAT 96 >seq18898 Length=402 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| |||||||| || || ||||| || || |||| |||| Sbjct 92 AGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCT 151 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || ||||| ||||| || |||||||| | || | ||||||||||| Sbjct 152 TCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCT 211 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | | || | ||| ||| || || || | ||| || ||| Sbjct 212 TGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTC 271 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| |||||||| ||||| || ||||| Sbjct 272 TTTCCCGTTAGGGTCTTCACAAAAATTTGCAT 303 >seq33159 Length=163697 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 97915 AGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGTCCATCT 97856 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||||| | ||||||||| | || | ||||||||||| Sbjct 97855 TCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 97796 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || || | | || | ||| | ||| || || | || ||||| Sbjct 97795 TGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTT 97736 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || ||||||||||||||||| Sbjct 97735 TTACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| |||| ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 98143 AGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCT 98084 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||||| | ||||||||| | || | || |||||||| Sbjct 98083 TCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 98024 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| ||| || || || || | || || |||||| || | || |||| Sbjct 98023 TGGATTTTAGCTTTCAC--ATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGG 97966 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || || | ||| ||||| ||||||||||| Sbjct 97965 TTTTACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| ||||| || || | || |||| Sbjct 97003 AGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTACGACCATCC 96944 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||||||||||| | ||||||||| | || | ||||||||||| Sbjct 96943 TCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 96884 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| || | | || | || | ||| || || | ||| || ||| Sbjct 96883 TGGATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGTGATAGTC 96824 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||||| ||||| |||||||| Sbjct 96823 TTGCCGGTCAATGTCTTCACAAAAATCTGCAT 96792 Score = 104 bits (114), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||||||||| || || |||| |||| || | ||||| || || || Sbjct 97667 CTCCTTCTGGATGTTATAGTCTGAGAGTGTGCGTCCATCTTCTAACTGCTTGCCAGCAAA 97608 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| |||||||||||| | || | || ||||| || | ||||| ||||| | Sbjct 97607 GATCAACCGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATTTTAGCCTTGAC--A 97550 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | || | || || || | ||| |||||||| ||||| | |||||| Sbjct 97549 TTCTCGATGGTATCCGAAGGTTCAACTTCTAGGGTGATGGTCTTACCCGTCAAGGTCTTC 97490 Query 34964 ACAAAGATCTGCATG 34978 |||||||| |||||| Sbjct 97489 ACAAAGATTTGCATG 97475 >seq33871 Length=3159 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 2914 AGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCT 2973 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||||| | ||||||||| | || | || |||||||| Sbjct 2974 TCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 3033 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | || | || || || | ||| |||| Sbjct 3034 TGGATTTTAGCTTTGAC--ATTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGG 3091 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || || ||||| || || ||||||||||| Sbjct 3092 TTTTGCCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq21507 Length=372 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| || || |||||||| | ||| ||| ||||| || || ||||| || Sbjct 248 CCACCGCGCAATCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGAG 189 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| | || || || || || || || ||||| | | |||||| ||| | || Sbjct 188 AGTGTGCGGCCGTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGGGG 129 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | ||||| ||| || | | || | || || ||| || Sbjct 128 ATTCCCTCCTTGTCTTGGATTTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAACC 69 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || |||||||| |||||||||||||| || || |||||||| Sbjct 68 TCTAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 22 >seq36087 Length=321 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || ||||| || || |||| |||| || || || || || ||||| Sbjct 190 CTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAA 131 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| ||||| |||||||| | || | ||||||||||| | ||||| || || Sbjct 130 GATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATTTTAGCCTTCACATT 71 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| | ||| || || | || |||||||| ||||| || || || || Sbjct 70 TTCAATAGTGTCAGATGGCTCCACTTCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCAC 11 Query 34966 AAAGATCTGC 34975 |||||||||| Sbjct 10 AAAGATCTGC 1 >seq55175 Length=171662 Score = 98.7 bits (108), Expect = 6e-16 Identities = 321/497 (65%), Gaps = 4/497 (1%) Strand=Plus/Minus Query 6034 TTGGCACCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCAG 6093 || || ||||| || || || || ||||| |||||||| || || || |||||||||||| Sbjct 39574 TTAGCTCCCTTACCGCCAGGGAATTCCCAATCGATGTCAACACCATCGAAGAACTTCCAG 39515 Query 6094 GTCTCCAGAAACTCGCGGACGCTTGTGACGAACACCTCACGCTTAGAGTCATCGTTCATG 6153 || | || || || || ||||| || ||||| | || | | Sbjct 39514 GTTTGAAGGAAATCTTTCACAGAATCAACGAAGCGGTCCCGCTTCACTTTGTCAGTGAAA 39455 Query 6154 AAATAAAACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGAGGGG 6213 || | || ||||| | ||||| ||||| ||||| ||||||| | | || Sbjct 39454 AAGAAGAAAGGATCAGCAAGAGTCCAGCCCCCAATGGAAGGTAGGATTTTAAGGTCCGGC 39395 Query 6214 TTGTGACGTTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTACGCC 6273 | |||| | || ||||||||| ||||| || || ||||| ||| || | | Sbjct 39394 CTAGCTTGTTTAAGGGACATCAGCTGACCAAAATTGCCTTTGTAAGGTTCATTCCAAGAA 39335 Query 6274 TCAACACCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTTGAAG 6333 | || |||||||| ||||| | || ||||| |||||||| |||||||| Sbjct 39334 GACAAGCCCTTCTGTGGCTTTTGAAGAGCAGCCCAAGGATCGTGAATGGAAACCTTGAAA 39275 Query 6334 TCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCTTGA 6391 || || || ||| ||| || ||| || || | ||| | || | || | ||| | Sbjct 39274 TCTTCACGGCCACTGCATGAACGCTGAAGAGCTTGAAAACTGCCTTCG--ATTTCCTTTA 39217 Query 6392 GGGCGTCGTTTATGCCGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCA 6451 ||| || ||||| || |||||||||||||| || || |||| || || |||| Sbjct 39216 AACTGTCATTGATGCCATCGCCTCCACAAATTGGAATAAAACCATACAAAAGATGAGTCA 39157 Query 6452 GATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCACGA 6511 ||||||| ||||||| || | || || | || || || ||||| ||||||| Sbjct 39156 GATTAGGAATTGGTATACGATCGACTGGGAATTTTCGTGGGTAAACACCCCATTCCACGA 39097 Query 6512 AATACGCACCGACGACT 6528 | || || || || ||| Sbjct 39096 AGTAAGCTCCAACAACT 39080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325452771530930