Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq33159 105 1e-17 seq27463 89.7 8e-13 >seq33159 Length=163697 Score = 105 bits (116), Expect = 1e-17 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || || | |||||| ||||||| || || || || | || || |||| || | Sbjct 97249 TGCAGATTTTTGTTAAAACACTAACAGGGAAGACTATCACATTAGAGGTGGAACCATCA- 97307 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||||| ||| ||||| ||| ||| ||||||||||| || ||||| Sbjct 97308 GACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGATCAG 97367 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | || || ||||| ||||| || | || ||| | | || | | || || ||| Sbjct 97368 CAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCCGACTACAAT 97427 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || ||||||||||| || | || || || | || || |||||||| Sbjct 97428 ATTCAAAAAGAATCTACACTTCACTTGGTGCTCCGTTTGAGAGGAGG 97474 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || || || || || || || | || || |||| || Sbjct 97021 TGCAGATTTTCGTCAAAACCTTGACTGGGAAGACCATCACATTGGAAGTTGAACCCTCCG 97080 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || ||| ||| ||||||||||| || || || | Sbjct 97081 ACACAATTGAAAATGTTAAGGCGAAGATCCAAGATAAGGAAGGCATTCCCCCAGACCAGC 97140 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||| || ||||| || || ||| | || || |||| || |||| Sbjct 97141 AGAGGTTGATCTTTGCCGGCAAACAGTTGGAGGATGGACGTACATTGTCAGACTACAATA 97200 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || ||||| ||| | || ||||| | || ||||||||||| Sbjct 97201 TCCAGAAGGAATCTACTCTTCACTTAGTCCTCCGTTTAAGAGGAGG 97246 >seq27463 Length=372575 Score = 89.7 bits (98), Expect = 8e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| | || || ||||| || || | || || ||| | Sbjct 145864 TGCAGATCTTCGTTAAAACCCTCACGGGTAAAACCATAACGTTAGAGGTTGAAGCCTCTG 145805 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||||||| ||||| ||| ||||| ||||||||||| ||||| | Sbjct 145804 ACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGC 145745 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || || || || ||||| || || ||| | || || | || || || | Sbjct 145744 AAAGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTTTGTCGGACTACAACA 145685 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAA 146260 | || || ||||| || | || || || || | | |||||||||| Sbjct 145684 TCCAGAAGGAATCAACACTTCACTTGGTTTTGAGGCTTCGAGGAGGTAA 145636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785572156472400