Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq33159 134 9e-27 seq33871 113 3e-20 seq27463 105 4e-18 seq36087 91.5 1e-13 >seq33159 Length=163697 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| | |||||| || || || |||||||| || ||||| ||||| Sbjct 97474 CCTCCTCTCAAACGGAGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAA 97415 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || || | || || || ||||| || | ||| ||||||||| | || Sbjct 97414 AGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGA 97355 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || |||||| || || ||||| || | |||||| || |||||| Sbjct 97354 ATGCCTTCCTTATCTTGAATTTT-TGCTTTAACATTCTCAATGGTGTCTGATGGTTCCAC 97296 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || ||||||| ||||| ||||| |||||||| Sbjct 97295 CTCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAACAAAAATCTGCAT 97248 Score = 122 bits (134), Expect = 6e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| || | | ||| | ||||||||| || || ||| || || |||||||| || | Sbjct 98160 CACCGCCACGAAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 98101 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 ||||||||||| | || || | || || ||||| || ||||| | |||||| ||| | | Sbjct 98100 AGAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGG 98041 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| ||||| |||| |||| || | |||||| | || Sbjct 98040 GAATGCCTTCCTTGTCCTGGATTTTAGCTTTC-ACATTCTCAATGGTGTCCGAGGGCTCG 97982 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| || || |||||||| |||||||||||| Sbjct 97981 ACTTCCAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAGATCTGCATA 97931 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || || ||| || || |||||||| || || Sbjct 97931 ACCACCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGA 97872 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||||||| | || || | || || ||||| || ||||| | |||||| ||| | || Sbjct 97871 GAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGG 97812 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| |||||| | | ||||| || | || || | || | Sbjct 97811 AATACCCTCCTTGTCTTGAATTTT-AGCCTTAACATTTTCAATAGTATCAGAAGGCTCAA 97753 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| |||||||| || | ||||||||||||||||||||| Sbjct 97752 CTTCCAATGTGATGGTTTTACCAGTCAGTGTTTTTACAAAGATCTGCATA 97703 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | || ||||| || ||| ||| || || ||||| || || || Sbjct 97703 ACCACCACGCAGACGGAGTACTAAATGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGA 97644 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||||||| | || || || || || || ||||| ||||| || ||||| ||| | || Sbjct 97643 GAGTGTGCGTCCATCTTCTAACTGCTTGCCAGCAAAGATCAACCGTTGCTGGTCTGGGGG 97584 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||||| | | |||| || | ||| || | ||| | Sbjct 97583 AATACCTTCCTTATCCTGGATTTT-AGCCTTGACATTCTCGATGGTATCCGAAGGTTCAA 97525 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || ||||| || || || || |||||||| ||||| Sbjct 97524 CTTCTAGGGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATTTGCAT 97476 >seq33871 Length=3159 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| || | | ||| | |||||| || || || ||| || || |||||||| || | Sbjct 2897 CACCGCCACGAAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 2956 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 ||||||||||| | || || | || || ||||| || ||||| | |||||| ||| | | Sbjct 2957 AGAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGG 3016 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| ||||| | || |||| || | |||||| | |||| Sbjct 3017 GAATGCCTTCCTTGTCCTGGATTTT-AGCTTTGACATTCTCAATGGTGTCTGAAGGTTCC 3075 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| ||||| || |||| ||||| || |||||||||||| Sbjct 3076 ACTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTAACGAAGATCTGCATA 3126 >seq27463 Length=372575 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || ||||| || || || || || || |||||||| || || | |||||| | || Sbjct 145654 AAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAAAGTGCGTCCATCT 145713 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 ||||| ||||| ||||| || ||||| | ||||||||| | || | || |||||||| Sbjct 145714 TCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCCTCTTTGTCT 145773 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||||||| ||| | ||| || | ||||| | ||| || || | ||| || || Sbjct 145774 TGAATTTTCGCTTTTA-CATTTTCGATAGTGTCAGAGGCTTCAACCTCTAACGTTATGGT 145832 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 |||||| || | ||||| || ||||||||||| ||| Sbjct 145833 TTTACCCGTGAGGGTTTTAACGAAGATCTGCATTGTT 145869 >seq36087 Length=321 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| || | || || ||||| |||||| ||| || || || ||||| || || Sbjct 226 ACCACCTCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGA 167 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | ||||| || || || || | |||||||| || | || Sbjct 166 GAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGG 107 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | || || ||||| ||||| |||| ||| ||| ||||| || |||| Sbjct 106 GATGCCCTCCTTGTCTTGGATTTTAGCCTTCA-CATTTTCAATAGTGTCAGATGGCTCCA 48 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGC 33747 | || | |||||| || || || || | |||||| |||||||||||| Sbjct 47 CTTCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328461752342400