Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq27463 152 1e-31 seq33871 114 3e-20 seq33159 114 3e-20 seq36087 107 5e-18 seq32636 107 5e-18 >seq27463 Length=372575 Score = 152 bits (168), Expect = 1e-31 Identities = 160/208 (77%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| || || || || || ||| |||||||| ||||| Sbjct 145850 AAAACCCTCACGGGTAAAACCATAACGTTAGAGGTTGAAGCCTCTGACACTATCGAAAAT 145791 Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| || ||| |||||||| ||||| || ||| || || |||||| | ||||| Sbjct 145790 GTAAAAGCGAAA-ATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAAAGATTGATCTT 145732 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| || ||||||||||||||| | |||||| | || |||||| ||||||| || || Sbjct 145731 CGCCGGCAAACAGTTGGAAGATGGACGCACTTTGTCGGACTACAACATCCAGAAGGAATC 145672 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || |||||| | |||||||| |||||| Sbjct 145671 AACACTTCACTTGGTTTTGAGGCTTCGA 145644 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| |||||||| | |||||| || || || ||||||| || ||||| | |||||| Sbjct 145644 TCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAAAGT 145703 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||| ||| || ||||||||||| | | ||| ||| Sbjct 145704 GCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGA 145749 >seq33871 Length=3159 Score = 114 bits (126), Expect = 3e-20 Identities = 141/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| ||||| |||||||||||| ||| ||||| | || Sbjct 3110 AAAACCCTAACTGGCAAAACCATCACCTTGGAAGTGGAACCTTCAGACACCATTGAGAAT 3051 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || || || || ||||| ||| || ||| || || | ||||| Sbjct 3050 GTCAAAGCTAAA-ATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGAGGTTGATCTT 2992 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | ||||||||| | || | | || |||||| ||||||| ||||| Sbjct 2991 CGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCTGACTACAACATCCAGAAGGAGTC 2932 Query 206364 TACTCTTCAC 206373 ||| |||||| Sbjct 2931 TACCCTTCAC 2922 >seq33159 Length=163697 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || || || ||||| |||||||| ||| || ||| Sbjct 97023 CAGATTTTCGTCAAAACCTTGACTGGGAAGACCATCACATTGGAAGTTGAACCCTCCGAC 97082 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| || ||| ||||| ||||| || ||||| ||| || ||| || Sbjct 97083 ACAATTGAAAATGTTAAGGCGAAGATCCAAGATAAGGAAGGCATTCCCCCAGACCAGCAG 97142 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| || |||||||| |||||| | || ||| | || ||||| || Sbjct 97143 AGGTTGATCTTTGCCGGCAAACAGTTGGAGGATGGACGTACATTGTCAGACTACAATATC 97202 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| || |||||||||||| Sbjct 97203 CAGAAGGAATCTACTCTTCAC 97223 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || ||||| ||||| |||||||| || |||||| Sbjct 97707 CAGATCTTTGTAAAAACACTGACTGGTAAAACCATCACATTGGAAGTTGAGCCTTCTGAT 97766 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || |||||||| || || || ||| || ||| || Sbjct 97767 ACTATTGAAAATGTTAAGGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 97826 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| |||||| | ||||||||| | || | | || |||||| || Sbjct 97827 AGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCAGACTACAACATC 97886 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| |||||||| || ||| Sbjct 97887 CAGAAGGAGTCTACCCTCCAC 97907 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||| ||||||| || || ||||| | || Sbjct 97947 AAAACCTTGACTGGTAAAACCATCACTCTGGAAGTCGAGCCCTCGGACACCATTGAGAAT 98006 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || || || || ||||| ||| || ||| || || | ||||| Sbjct 98007 GTGAAAGCTAAA-ATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGAGGTTGATCTT 98065 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | ||||||||| | || | | || |||||| ||||||| ||||| Sbjct 98066 CGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCTGACTACAACATCCAGAAGGAGTC 98125 Query 206364 TACTCTTCA 206372 ||| ||||| Sbjct 98126 TACCCTTCA 98134 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || || || ||||| ||||| ||||| ||| ||| Sbjct 96795 CAGATTTTTGTGAAGACATTGACCGGCAAGACTATCACCTTGGAGGTGGAGCCTTCGGAC 96854 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||| || ||| || || || || || ||| || ||| || Sbjct 96855 ACAATTGAAAATGTTAAAGCTAA-GATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCA 96913 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | ||||||||||| || ||| |||| ||||| | || | | || |||||| | Sbjct 96914 GAGGTTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACACTCTCTGACTACAACAT 96973 Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373 |||||| |||||||| |||||| Sbjct 96974 CCAGAAGGAGTCTACCCTTCAC 96995 >seq36087 Length=321 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||||| || || || || ||||| ||||||||||| |||||| Sbjct 2 CAGATCTTTGTGAAAACGCTTACGGGCAAGACCATCACGTTGGAAGTGGAGCCATCTGAC 61 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || || ||||| || || || || || ||| || Sbjct 62 ACTATTGAAAATGTGAAGGCTAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAGCAG 121 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| |||||||| || || ||| | || ||||| | ||| | | || ||||| || Sbjct 122 CGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCTGACTACAATATC 181 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||||| ||||| || | ||||||||||| ||| Sbjct 182 CAGAAGGAGTCCACTCTGCATTTAGTTTTGAGACTGCGA 220 >seq32636 Length=346 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || ||||| ||||| ||||||||||| ||| ||||| | || Sbjct 111 AAGACCCTCACTGGTAAAACCATCACCTTGGAAGTGGAGCCTTCGGACACCATTGAGAAT 170 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||| ||| || ||| || | || |||||| Sbjct 171 GTAAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAGCAGCGTCTGATCTTC 230 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || |||||||||| | || || |||| || ||| ||||||| ||||| Sbjct 231 GCTGGCAAACAACTGGAAGATGGTCGCACCCTGTCCGACTATAACATCCAGAAGGAGTCC 290 Query 206365 ACTCTTCACCTTGT 206378 || || |||||||| Sbjct 291 ACCCTCCACCTTGT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180905158482870