Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq28098 102 3e-18 seq43634 98.7 3e-17 seq39759 98.7 3e-17 seq37142 98.7 3e-17 seq34220 98.7 3e-17 seq30857 98.7 3e-17 seq28094 98.7 3e-17 seq13517 98.7 3e-17 seq56959 96.9 1e-16 seq58891 95.1 4e-16 >seq28098 Length=202414 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 13938 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 13879 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 13878 GATCCCGGGTTTCGGC 13863 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 143588 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 143647 Query 2825 AACCCCGGGCTTCAGC 2840 || |||||| ||| || Sbjct 143648 AATCCCGGGTTTCGGC 143663 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 20894 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 20953 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 20954 ATCCCGGGTTTCGGC 20968 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 23691 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 23750 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 23751 CCGGGTTTCGGC 23762 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||| ||||||||||||| | | Sbjct 24312 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAGAGGTCCCTGGTTCGATC 24253 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 24252 CCGGGTTTCGGC 24241 >seq43634 Length=1934 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 250 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 191 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 190 CCGGGTTTCGGC 179 >seq39759 Length=128263 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 99584 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 99525 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 99524 CCGGGTTTCGGC 99513 >seq37142 Length=354692 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 261145 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 261204 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 261205 CCGGGTTTCGGC 261216 >seq34220 Length=189552 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 85868 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 85927 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 85928 CCGGGTTTCGGC 85939 >seq30857 Length=73608 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 60959 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 60900 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 60899 CCGGGTTTCGGC 60888 >seq28094 Length=1908 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1591 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1650 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1651 CCGGGTTTCGGC 1662 >seq13517 Length=568888 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 447894 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 447953 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 447954 CCGGGTTTCGGC 447965 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 449882 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 449823 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 449822 CCGGGTTTCGGC 449811 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 462312 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 462371 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 462372 CCGGGTTTCGGC 462383 >seq56959 Length=1090083 Score = 96.9 bits (106), Expect = 1e-16 Identities = 72/83 (87%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 2755 GTACTGTGTT-TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAG 2813 ||| ||||| | | || ||||||||| |||||||||||| ||||||||||||||||||| Sbjct 1032985 GTATTGTGTACTGTCGCCGAAGTAGCTTAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG 1033044 Query 2814 GTCCCTGGTTCAACCCCGGGCTT 2836 | ||||||||| |||||||| || Sbjct 1033045 GCCCCTGGTTCGACCCCGGGTTT 1033067 >seq58891 Length=2612 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| || ||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 1961 GCCGAAATAACTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 2020 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2021 CCGGGTTTCGGC 2032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15839117223150