Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq20129 147 2e-30 seq26923 105 5e-18 seq33159 89.7 4e-13 >seq20129 Length=608 Score = 147 bits (162), Expect = 2e-30 Identities = 192/266 (72%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 99851 ATGTCCGGCCCCGTGCACCCTAAATACGGCACTAAATCTGCACGTTTAGAAACTTTTGTG 99910 ||| |||||||||||||||| |||| | | || | || ||| | || || Sbjct 2 ATGCCCGGCCCCGTGCACCCCCGGTACGCCTCCGAAGCGGCGCGTCTTCGCACCTTCAAA 61 Query 99911 GATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTAC 99970 || ||||||| || |||| |||||||| || ||||||| ||||||||||| | ||| Sbjct 62 GACTGGCCGCGGTGTATGAAGCAAAAACCCGAAGAATTGGCGGAAGCCGGTTTCTTCTAC 121 Query 99971 ACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAA 100030 |||||| | || |||||| ||||| || | |||||||| ||||| ||||||||||| Sbjct 122 ACCGGCCACGGAGACAAAACGAAATGCTTCTACTGCGACGGTGGCCTGAAAGACTGGGAG 181 Query 100031 AGCACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGG 100090 | | ||||| || ||| | | ||||| || ||||| || | ||| | ||||| | Sbjct 182 AACGACGACGTCCCATGGGAGCAGCACGCGCGCTGGTTCGACAGATGCGCTTACGTTCAA 241 Query 100091 CTTGTAAAGGGTTACGACTACGTGCA 100116 || |||||||| ||||||||| || Sbjct 242 CTGGTAAAGGGCCGCGACTACGTTCA 267 >seq26923 Length=415599 Score = 105 bits (116), Expect = 5e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 99637 CAACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGA 99696 |||||| || ||||| | || || | |||||||| || ||||| ||||| ||||| || Sbjct 192578 CAACGGCTTCTATTACCTCGGCCGTGGCGACGAAGTTCGTTGCGCCTTTTGTAAAGTCGA 192637 Query 99697 AATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCA 99756 ||| ||||||||| | |||||||||||||| || ||| || | || ||||| || || Sbjct 192638 AATCATGCGCTGGGTCGAGGGCGACGACCCTGCGAAAGACCACCAGCGTTGGGCCCCACA 192697 Query 99757 ATGCCCGTTTATG 99769 ||| |||||| || Sbjct 192698 ATGTCCGTTTTTG 192710 >seq33159 Length=163697 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| ||||||||||||||| | || || ||||| || || | || ||||| Sbjct 97247 AATGCAGATTTTTGTTAAAACACTAACAGGGAAGACTATCACATTAGAGGTGGAACCATC 97306 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | || ||| ||||||| || || |||||| | ||| ||||| Sbjct 97307 AGACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGATCA 97366 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||| | ||||| | |||||| || || | |||||| || | ||| | ||| ||| Sbjct 97367 GCAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTC--CGACTAC 97424 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||||||||||||||| || || || | | || ||||||| Sbjct 97425 AATATTCAAAAAGAATCTACACTTCACTTGGTGCTCCGTTTGAGAGGAGG 97474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402033091885760