Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq18898 111 1e-19 seq32636 105 6e-18 seq36087 100 3e-16 seq27463 98.7 9e-16 seq33159 93.3 4e-14 >seq18898 Length=402 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| ||||| || || ||||| |||| | || || | || || Sbjct 94 CACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCTTC 153 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || ||||||| ||||||||||| | ||||| | ||||||||| Sbjct 154 CAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTG 213 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||||| | || | | ||||| | ||| ||||| | ||||| || || Sbjct 214 GATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTCTT 273 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 ||||| | || |||||||| || |||||| || Sbjct 274 TCCCGTTAGGGTCTTCACAAAAATTTGCATTTTG 307 >seq32636 Length=346 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | || ||| | || | || |||||| || ||||| || |||| Sbjct 324 TTCCACCACGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGG 265 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || ||| || | || ||||| || || || || || |||| ||||||||||| | || Sbjct 264 ACAGGGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAG 205 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| || ||||||||| |||||| ||| | | | | | ||||| | |||| Sbjct 204 GAATGCCTTCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCA 145 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| ||||| |||||||| || | || ||||| || || ||||||| Sbjct 144 CTTCCAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCATTC 94 >seq36087 Length=321 Score = 100 bits (110), Expect = 3e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | ||||| || ||||| | || |||||| || || ||||| || | Sbjct 225 CCACCTCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAG 166 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| ||||| || || || | ||||||||||| | || Sbjct 165 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGG 106 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| ||| || ||||| | || | | ||||| | ||||| Sbjct 105 ATGCCCTCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACT 46 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 35734 |||| |||||| || || ||||| | ||||||||||| |||||| Sbjct 45 TCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 >seq27463 Length=372575 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565 ||| || || || | |||||| ||||| || | || ||||| || |||||||| || Sbjct 145635 ATTACCTCCTCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTC 145694 Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625 | ||| || || | || |||| ||| || || || || ||||| | ||||| || | Sbjct 145695 CGACAAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGG 145754 Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATT 35684 |||| || ||| ||||| ||| ||| |||| | | || | | ||||| | || Sbjct 145755 TGGAATGCCCTCTTTGTCT-TGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTT 145813 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 | ||||| | ||| || ||||||||||| | ||||| || || ||||||||| Sbjct 145814 CAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCATT 145866 >seq33159 Length=163697 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| || |||||||| ||||| |||| | || || | || || Sbjct 97457 CACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAAAGTGTGCGACCATCTTC 97398 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||||||||||| || | || ||||| || | |||| || ||||| | | | Sbjct 97397 GAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTAT-CTT 97339 Query 35647 GATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 || |||||| || | | | | | ||||| | ||||||||| | ||||| || | Sbjct 97338 GAATTTTTGCTTTAACATTCTCAATGGTGTCTGATGGTTCCACCTCTAATGTGATAGTCT 97279 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || || | ||||| ||||| |||||||||| Sbjct 97278 TCCCTGTTAGTGTTTTAACAAAAATCTGCATTC 97246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450452856387600