Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23]
60,470 sequences; 374,815,656 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq39759 102 6e-17
>seq39759
Length=128263
Score = 102 bits (112), Expect = 6e-17
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909
|| ||||| ||||||||||| || || ||||| |||||||| ||||| || |||
Sbjct 66724 GTATTGGCATTTTTTGCTGCTTCTGATGGTATAGTTAATGAAAACTTGGTGGAACGATTT 66783
Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969
| |||||||||||| | |||||| | | |||||||| || |||||||| || ||
Sbjct 66784 TCACAAGAAGTTCAAATTGGTGAAGCAAGGTTCTTTTATGGATTCCAAATTGCTATGGAG 66843
Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCA 44015
||| | || || || |||||| | ||||| ||||| || ||||
Sbjct 66844 AATGTACACTCAGAGATGTACTCATTGCTGATTGATACTTATATCA 66889
Score = 102 bits (112), Expect = 6e-17
Identities = 154/213 (72%), Gaps = 11/213 (5%)
Strand=Plus/Plus
Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAG-CAGACTGGGCCCTTA 44096
|| || ||||| || ||||| |||| || | |||| | |||| |||||||||| ||
Sbjct 67112 TTATTCAATGCAATTGAAACTTTACCATGTG--TAAAGAAAAAGGCAGACTGGGCACTGC 67169
Query 44097 AATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGG 44153
||||||| | | || || ||||| ||||| | || || ||||||| ||| |
Sbjct 67170 AATGGATTGGCAGTAAAACTGCAAACTTTGGGGAACGGATAGTTGCCTTTGCAGCTGTAG 67229
Query 44154 AAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213
|||| || |||||||| ||| ||||| | ||||| ||||| ||||| || || ||||
Sbjct 67230 AAGGAATCTTCTTTTCCGGAAGCTTTGCCTCAATATTCTGGTTGAAGAAGCGGGGCTTGA 67289
Query 44214 TGCCTGGGTTGACGTTTTCA--AATGAGTTAAT 44244
|||| || |||| ||||| |||||| ||||
Sbjct 67290 TGCCCGGTCTGAC--TTTCAGCAATGAGCTAAT 67320
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 43685 GAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTAC 43744
||||||||| | || ||| | || || || ||||||| ||| || ||||||||||||
Sbjct 66041 GAAAATCCGCGGCGTTTCGTCATCTTCCCCATCCAATATCCTGATATCTGGCAAATGTAC 66100
Query 43745 AAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTT 43788
|||||||| | || ||||| ||||||| || ||||| |||||
Sbjct 66101 AAAAAAGCTGAAGCTTCATTCTGGACAGTGGAGGAAGTGGATTT 66144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397163083622350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |