Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq28771 82.4 6e-11 >seq28771 Length=922144 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/209 (70%), Gaps = 7/209 (3%) Strand=Plus/Minus Query 111775 AAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGC 111834 || || || || ||||||||||||| ||| | || |||||| ||||| ||||| ||| Sbjct 289705 AATCCTGTTATATGTGCAATCATGTGTGTTAAAAGTGAGTAACTGGCAATATTAAAAGGC 289646 Query 111835 ACACCTAGGCCCATATCTCCCGAT-CTTTGATATAGCTGACATGATAGTTTATTTTGTGA 111893 |||||||| |||||||| | || | |||||||| | | ||||| | || | || Sbjct 289645 ACACCTAGTCCCATATC-CGCGCTCCTTTGATACATCAAGCATGACAATTCTCCATCTGC 289587 Query 111894 CACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT----CCCATTCATAAAGG 111949 ||||| ||| || ||| ||| || || || | |||||| || | | | || Sbjct 289586 CACATGAAACTGGATAAGACAATGGCATGGTGGTAGTGCCATTAGACCAAGATCTGATGG 289527 Query 111950 GTCCCCATGCACACATGATCATCCTTCTG 111978 | ||||||||| || |||||||| ||| Sbjct 289526 AT-TCCATGCACATATTATCATCCTCCTG 289499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391656744666610