Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq36087 190 2e-43 seq18898 172 6e-38 seq32636 170 2e-37 seq33159 158 1e-33 seq16804 158 1e-33 seq21507 143 3e-29 seq33871 116 4e-21 seq28415 87.8 2e-12 >seq36087 Length=321 Score = 190 bits (210), Expect = 2e-43 Identities = 177/225 (79%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 ||| |||||||| || |||||||| |||||||| || || | || || ||| || ||| Sbjct 1 GCAGATCTTTGTGAAAACGCTTACGGGCAAGACCATCACGTTGGAAGTGGAGCCATCTGA 60 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | |||| |||| ||||||||||||| || ||||||||||| || || || |||||||| Sbjct 61 CACTATTGAAAATGTGAAGGCTAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAGCA 120 Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587 ||| || || || |||||||| || |||||||||| ||| || || | ||||| ||| | Sbjct 121 GCGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCTGACTACAATAT 180 Query 27588 CCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||||| |||||||| ||| |||| ||| | || || ||||| Sbjct 181 CCAGAAGGAGTCCACTCTGCATTTAGTTTTGAGACTGCGAGGTGG 225 >seq18898 Length=402 Score = 172 bits (190), Expect = 6e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| || || || ||||| || || || ||||| || | Sbjct 304 AATGCAAATTTTTGTGAAGACCCTAACGGGAAAGACAATCACCCTCGAGGTAGAAGCCTC 245 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | |||| |||||||||| || || ||||||||||| |||||||| ||||| Sbjct 244 TGACACTATCGAAAATGTGAAGGCTAAGATCCAAGACAAGGAGGGTATTCCTCCTGACCA 185 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || ||||| ||||| || || |||| ||| || || | ||||| || Sbjct 184 GCAGCGTCTGATATTCGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGACTACAA 125 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| |||||||| || ||||| | || | |||||||| || || Sbjct 124 TATCCAGAAGGAATCTACCCTTCACTTGGTGCTACGTCTTCGTGGCGG 77 >seq32636 Length=346 Score = 170 bits (188), Expect = 2e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || ||||| || || || || || || || | || || ||| | Sbjct 95 AATGCAAATCTTCGTGAAGACCCTCACTGGTAAAACCATCACCTTGGAAGTGGAGCCTTC 154 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | ||||| || || ||||||||||| || |||||||||||||| Sbjct 155 GGACACCATTGAGAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 214 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || ||||| || ||||| || |||| ||| ||||| | |||||||| Sbjct 215 GCAGCGTCTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACCCTGTCCGACTATAA 274 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| ||||| || || || || ||||||| || |||||| Sbjct 275 CATCCAGAAGGAGTCCACCCTCCACCTTGTGCTGCGTCTCCGTGGTGGA 323 >seq33159 Length=163697 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| | || || ||||| || || || || ||||| | Sbjct 97476 ATGCAAATCTTTGTGAAGACCTTGACGGGTAAGACCATCACCCTAGAAGTTGAACCTTCG 97535 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||||||||||| ||||| ||||| || ||||| ||||||||| Sbjct 97536 GATACCATCGAGAATGTCAAGGCTAAAATCCAGGATAAGGAAGGTATTCCCCCAGACCAG 97595 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || |||||||| ||||| | || |||| || || || |||||||||| Sbjct 97596 CAACGGTTGATCTTTGCTGGCAAGCAGTTAGAAGATGGACGCACACTCTCAGACTATAAC 97655 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || ||| |||| | ||||| || ||||| Sbjct 97656 ATCCAGAAGGAGTCCACACTCCATTTAGTACTCCGTCTGCGTGGTGG 97702 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || || || || || || || || | || |||||| | | Sbjct 97704 ATGCAGATCTTTGTAAAAACACTGACTGGTAAAACCATCACATTGGAAGTTGAGCCTTCT 97763 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | |||||||||||||| ||||||||||| ||||| ||||||||| Sbjct 97764 GATACTATTGAAAATGTTAAGGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 97823 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || || || ||||| || || |||| || || || ||||||| || Sbjct 97824 CAGAGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCAGACTACAAC 97883 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || | |||||||| ||||| Sbjct 97884 ATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCCGTCTTCGTGGTGG 97930 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | |||||||||||||| || | ||||| ||| | Sbjct 96792 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACTATCACCTTGGAGGTGGAGCCTTCG 96851 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || ||||| || |||||||||||||| ||||| ||||||||| Sbjct 96852 GACACAATTGAAAATGTTAAAGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 96911 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || || || || || || ||||||| |||||| || | ||||| || Sbjct 96912 CAGAGGTTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACACTCTCTGACTACAAC 96971 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| | || | ||||| || || || Sbjct 96972 ATCCAGAAGGAGTCTACCCTTCACTTGGTGCTCCGTCTACGTGGAGG 97018 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || || || || ||||| || || ||| | Sbjct 97932 ATGCAGATCTTCGTAAAAACCTTGACTGGTAAAACCATCACTCTGGAAGTCGAGCCCTCG 97991 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct 97992 GACACCATTGAGAATGTGAAAGCTAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 98051 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || || || ||||| || || |||| || || || | ||||| || Sbjct 98052 CAGAGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCTGACTACAAC 98111 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||| | || | |||||||| || || Sbjct 98112 ATCCAGAAGGAGTCTACCCTTCATTTGGTGCTCCGTCTTCGTGGCGG 98158 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || | || || ||||| || || | || ||||| | Sbjct 97020 ATGCAGATTTTCGTCAAAACCTTGACTGGGAAGACCATCACATTGGAAGTTGAACCCTCC 97079 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| || || || || ||||| || ||||| ||||||||| Sbjct 97080 GACACAATTGAAAATGTTAAGGCGAAGATCCAAGATAAGGAAGGCATTCCCCCAGACCAG 97139 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || || || | ||||||| ||||| | ||||||| ||| Sbjct 97140 CAGAGGTTGATCTTTGCCGGCAAACAGTTGGAGGATGGACGTACATTGTCAGACTACAAT 97199 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 |||| |||||||| |||||||| ||||| | ||| Sbjct 97200 ATCCAGAAGGAATCTACTCTTCACTTAGTCCTCCGT 97235 >seq16804 Length=240 Score = 158 bits (174), Expect = 1e-33 Identities = 129/157 (82%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 |||||||| |||||||| ||||| ||||| |||||||| || ||| | || || ||| || Sbjct 84 ATAATGCAGATCTTTGTGAAGACTCTTACTGGCAAGACCATCACTTTGGAAGTAGAGCCA 143 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| ||||| |||| |||||||||| || |||||||||||||| ||||| |||||| Sbjct 144 TCTGATACCATTGAAAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGAC 203 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 || ||||| || || || |||||||| || || |||| Sbjct 204 CAACAGCGACTCATCTTCGCTGGTAAACAGCTGGAGG 240 >seq21507 Length=372 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||| || ||||| ||||||||| | Sbjct 22 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTAGAGGTTGAGCCCTCC 81 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| |||| || ||||| || |||||||||||||| || ||||| ||| Sbjct 82 GATACCATCGAAAATGTGAAAGCCAAAATCCAAGACAAGGAGGGAATCCCCCCAGATCAG 141 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | |||| ||||| ||||| || || || || | || || || ||||||| ||| Sbjct 142 CAAAGGTTAATCTTTGCGGGTAAACAGCTAGAAGACGGCCGCACACTCTCAGACTACAAT 201 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || || || || | | | |||||||| Sbjct 202 ATCCAGAAAGAGTCTACCCTCCACCTGGTGCTCAGATTGCGCGGTGG 248 >seq33871 Length=3159 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || ||||| || || || | || || || | Sbjct 3125 ATGCAGATCTTCGTTAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTGGAACCTTCA 3066 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || |||||||| ||||||||||| || ||||| ||||||||| Sbjct 3065 GACACCATTGAGAATGTCAAAGCTAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 3006 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || || || ||||| || || |||| || || || | ||||| || Sbjct 3005 CAGAGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCTGACTACAAC 2946 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| | || | |||||||| || || Sbjct 2945 ATCCAGAAGGAGTCTACCCTTCACTTGGTGCTCCGTCTTCGTGGCGG 2899 >seq28415 Length=359998 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || || || || || || || || |||||||| | Sbjct 102362 ATGCAGATTTTCGTGAAAACTCTCACGGGGAAAACCATCACCCTCGAGGTTGAACCCTCG 102303 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | || ||||| |||||||||||||||||||| ||||| |||||| Sbjct 102302 GATACCATCGAGAATGTCAAAGCTAAGATTCAGGACAAGGAGGGAATCCCTCCGGACCAG 102243 Query 27526 CAG 27528 ||| Sbjct 102242 CAG 102240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569879316626400