Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq33159 127 1e-24 seq26923 111 1e-19 seq32636 109 3e-19 seq36087 104 1e-17 seq18898 96.9 2e-15 seq21507 89.7 3e-13 >seq33159 Length=163697 Score = 127 bits (140), Expect = 1e-24 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || || |||||| || ||||| || || || ||||| || Sbjct 97009 AGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTACGA 96950 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| ||||| || || || | ||| ||||| || || | |||||| Sbjct 96949 CCATCCTCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCC 96890 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||||| | |||||| | ||||||||| |||||| |||| ||| Sbjct 96889 TTGTCCTGGATCTTA-GCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGT 96831 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGT--TGATTGTA 34716 || || || ||||| || || ||||||||||||||||| | |||||||| Sbjct 96830 GATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCATCTTGTGATTGTA 96780 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||| ||||| || |||||| || ||||| || ||||| Sbjct 97930 CCACCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAG 97871 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||| || || || ||||| || || || | ||| ||||| || || Sbjct 97870 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 97811 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| ||| | ||||| | ||| || || ||| || Sbjct 97810 ATACCCTCCTTGTCT-TGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAAC 97752 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || |||||||| || | ||||| ||||| |||||||| Sbjct 97751 TTCCAATGTGATGGTTTTACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| | ||| | |||||| || || || || |||||||| || || || || Sbjct 97475 GCCTCCTCTCAAACGGAGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGA 97416 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| || | ||||| || || ||||| ||||| || | ||| || || || || || Sbjct 97415 AAGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGG 97356 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657 | || ||||| ||| ||| ||||| |||||| | ||| |||||| |||| Sbjct 97355 AATGCCTTCCTTATCT-TGAATTTTTGCTTTAACATTCTCAATGGTGTCTGATGGTTCCA 97297 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || || || || |||| ||||| |||||||||||||| Sbjct 97296 CCTCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAACAAAAATCTGCAT 97248 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | || || || ||||| ||||| || || || || ||||| Sbjct 97246 CCTCCTCTTAAACGGAGGACTAAGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCTGAC 97187 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | || || | ||||| |||||||| || || | ||| ||||| || || Sbjct 97186 AATGTACGTCCATCCTCCAACTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 97127 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||| ||| |||||| | ||||| | ||||||||| | || || Sbjct 97126 ATGCCTTCCTTATCTTGGATCTTC-GCCTTAACATTTTCAATTGTGTCGGAGGGTTCAAC 97068 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || || ||||| || ||||||||||| Sbjct 97067 TTCCAATGTGATGGTCTTCCCAGTCAAGGTTTTGACGAAAATCTGCAT 97020 >seq26923 Length=415599 Score = 111 bits (122), Expect = 1e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 46850 CCCGAAGTGATGGCACGTAACGGATTTTATTATCTTGGAAGAGGTGATGAAGTTCGATGC 46909 |||||| | | || || ||||| || ||||| || || | || || |||||||| ||| Sbjct 192561 CCCGAACAGCTCGCGCGCAACGGCTTCTATTACCTCGGCCGTGGCGACGAAGTTCGTTGC 192620 Query 46910 GCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAGAGGGTGATGATCCTGCCGAAGACCAT 46969 |||||||| || || || |||||||| |||| ||||| || || ||||| ||||||| Sbjct 192621 GCCTTTTGTAAAGTCGAAATCATGCGCTGGGTCGAGGGCGACGACCCTGCGAAAGACCAC 192680 Query 46970 AAACGTTGGGCTCCTCAGTGTCCGTT 46995 | |||||||| || || |||||||| Sbjct 192681 CAGCGTTGGGCCCCACAATGTCCGTT 192706 >seq32636 Length=346 Score = 109 bits (120), Expect = 3e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||| | ||||| ||| |||||| || |||||||| || || || || || Sbjct 313 AGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGA 254 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| |||||||| || || || || | |||||| ||||| || || | || ||| Sbjct 253 CCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCC 194 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| |||||| |||| ||| ||||| ||||||||||| ||| Sbjct 193 TTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTG 134 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||||||| || | || ||||| || || ||||| Sbjct 133 ATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCAT 96 >seq36087 Length=321 Score = 104 bits (114), Expect = 1e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| || | ||| || ||||| |||||| |||||| || || || || || || Sbjct 225 CCACCTCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAG 166 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || || |||||||| || || || | ||||| ||||| || || Sbjct 165 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGG 106 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| ||| | || || | ||| ||||| |||||| Sbjct 105 ATGCCCTCCTTGTCTTGGAT-TTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCAC 47 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGC 34704 ||||| || || || || || || | |||||||||||| |||||| Sbjct 46 TTCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 >seq18898 Length=402 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | |||||| || || || ||||| || || || || || ||| Sbjct 77 CCGCCACGAAGACGTAGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAA 136 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || || ||||| | |||||| ||||| || || Sbjct 137 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGA 196 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | |||||||||||| |||||| || | | || ||||| | || || Sbjct 197 ATACCCTCCTTGTCTTGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACC 256 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || | ||| || || || || |||| || ||||||||||| ||||| ||| Sbjct 257 TCGAGGGTGATTGTCTTTCCCGTTAGGGTCTTCACAAAAATTTGCATTTTG 307 >seq21507 Length=372 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||||| || ||| || || || || || ||||| ||||| || ||||||| Sbjct 231 CACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGAGAGTGTGCGGCCGTCTTC 172 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || |||||||| ||||| ||||| | || || || || || | ||||||||||||| Sbjct 171 TAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGGGGATTCCCTCCTTGTCTTG 112 Query 34617 GATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 ||| ||| | ||| || | || || || | ||| || || | || || || | Sbjct 111 GAT-TTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAACCTCTAGAGTGATGGTCT 53 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 | || || | || || || ||||||||||| |||| Sbjct 52 TGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314497651169510