Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq18898 199 9e-46 seq32636 159 8e-34 seq21507 152 1e-31 seq33159 149 1e-30 seq33871 140 8e-28 seq27463 140 8e-28 seq16804 127 5e-24 seq36087 125 2e-23 seq28415 109 1e-18 >seq18898 Length=402 Score = 199 bits (220), Expect = 9e-46 Identities = 179/225 (80%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||| || | |||||| || || || || ||||| || || || | ||| || Sbjct 82 ACGAAGACGTAGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGT 141 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||||||||||| ||||| || || || || ||||||||||||| || Sbjct 142 GCGACCATCTTCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACC 201 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| ||||| |||||||| ||||||||| ||| |||||||| Sbjct 202 CTCCTTGTCTTGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAG 261 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||||||||| || ||||| ||||| | |||||||| Sbjct 262 GGTGATTGTCTTTCCCGTTAGGGTCTTCACAAAAATTTGCATTTT 306 >seq32636 Length=346 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || ||||||||||| || | ||||| | |||||| Sbjct 307 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATCT 248 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || ||||| |||||||| || || || ||||| ||||||| |||||||||||| Sbjct 247 TCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCC 188 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || |||||||| || || || || | ||||| || Sbjct 187 TGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATGGTT 128 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||| || || | |||||| Sbjct 127 TTACCAGTGAGGGTCTTCACGAAGATTTGCATT 95 >seq21507 Length=372 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || ||||| || || |||||||| ||||| || || || | || || | || Sbjct 237 TCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGAGAGTGTGCGGCC 178 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| ||||| || || || ||||| | | ||| || || || || | ||| ||||| Sbjct 177 GTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGGGGATTCCCTCCTT 118 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || |||||| ||||||||||| || ||| |||||||| |||||||| Sbjct 117 GTCTTGGATTTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAACCTCTAGAGTGAT 58 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| |||||||| ||||| || || | |||||| || Sbjct 57 GGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 19 >seq33159 Length=163697 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||||| || ||||| || |||||||| || || | || || Sbjct 98153 ACGAAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGT 98094 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||| ||||||||||| |||||||| | | || ||||| || |||| || Sbjct 98093 GCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCC 98034 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||| || |||||| || || |||||||| ||| || || || || Sbjct 98033 TTCCTTGTCCTGGATTTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAG 97974 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| || || || || | || ||||| || | |||||| Sbjct 97973 AGTGATGGTTTTACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || |||||||| || ||||||||||| || | || || | ||||||||| | |||| Sbjct 97678 TGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGAGAGTGTGCGTCCATCTTCTAACTGC 97619 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || ||||| | ||||| ||||| || |||| |||||||| |||||||| || Sbjct 97618 TTGCCAGCAAAGATCAACCGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATTTTA 97559 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || || |||||||| || || |||||| || || ||||| ||||| ||||| Sbjct 97558 GCCTTGACATTCTCGATGGTATCCGAAGGTTCAACTTCTAGGGTGATGGTCTTACCCGTC 97499 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| | ||||| Sbjct 97498 AAGGTCTTCACAAAGATTTGCAT 97476 Score = 138 bits (152), Expect = 3e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | |||||| || ||||| || |||||||| || || | || Sbjct 97016 TCCACGTAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAG 96957 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| |||||||| ||||| |||||||| | | || ||||| || |||| Sbjct 96956 TGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAAT 96897 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||||||||| ||| || ||||| || ||||| || || ||||| Sbjct 96896 GCCCTCCTTGTCCTGGATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTC 96837 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTT 211123 | ||||| ||||| || || | ||||| ||||| | |||||| || || || Sbjct 96836 CAAGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCATCTTGTGATT 96783 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| || || ||||| || |||||||| || || | || || Sbjct 97925 ACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGT 97866 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||| ||||||||||| |||||||| | | || ||||| || |||| || Sbjct 97865 GCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACC 97806 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || || || || || ||||| || || ||||| ||||| || | Sbjct 97805 CTCCTTGTCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAA 97746 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || || || |||||||| | |||||| Sbjct 97745 TGTGATGGTTTTACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 >seq33871 Length=3159 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | |||||| || ||||| || |||||||| || || | || || Sbjct 2904 ACGAAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGT 2963 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||| ||||||||||| |||||||| | | || ||||| || |||| || Sbjct 2964 GCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCC 3023 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||| || ||| || || || |||||||| || ||| || || | Sbjct 3024 TTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAA 3083 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || || || || || || | |||||| Sbjct 3084 GGTGATGGTTTTGCCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq27463 Length=372575 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| || | || | |||||| || || || || |||||||| || |||| | || Sbjct 145645 CGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAAAGTG 145704 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||||||||| ||| ||||| |||||||| | | ||| || || || |||| || Sbjct 145705 CGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCC 145764 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| || || || ||| || |||||||| ||||||||| ||||||||| | Sbjct 145765 TCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTAAC 145824 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || |||||||| || || || || | ||||||| Sbjct 145825 GTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCATT 145866 >seq16804 Length=240 Score = 127 bits (140), Expect = 5e-24 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || |||||||| || || |||||||| || |||| || ||||||||| Sbjct 238 TCCAGCTGTTTACCAGCGAAGATGAGTCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 179 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| ||||| ||||| ||||| || || || | |||||| ||| Sbjct 178 TGGATCTTAGCCTTCACATTTTCAATGGTATCAGATGGCTCTACTTCCAAAGTGATGGTC 119 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || |||||||| ||||| | ||||||| Sbjct 118 TTGCCAGTAAGAGTCTTCACAAAGATCTGCATT 86 >seq36087 Length=321 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || ||||| | || | || ||||||||||| || ||||| || || || | || || Sbjct 219 CGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTG 160 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || ||||| || || |||||||| || || || |||||||| || | || Sbjct 159 CGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCC 100 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| ||||| || ||||| ||||| || |||||||| || || || | Sbjct 99 TCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACTTCCAAC 40 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112 ||||| ||||| ||||| || || || ||||| | |||| Sbjct 39 GTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 >seq28415 Length=359998 Score = 109 bits (120), Expect = 1e-18 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052 || ||||| ||||| | ||| ||||||||||| ||||| ||| || || |||||||| Sbjct 102241 TGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGAATCTTAGCTTTGACATTCTCGATGGTA 102300 Query 211053 TCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112 || ||| |||||||||||| ||||| || || ||||||||||| || || || | |||| Sbjct 102301 TCCGAGGGTTCAACCTCGAGGGTGATGGTTTTCCCCGTGAGAGTTTTCACGAAAATCTGC 102360 Query 211113 ATTTT 211117 || || Sbjct 102361 ATCTT 102365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158253921631550