Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq27463 159 2e-34 seq33159 113 3e-20 seq21507 113 3e-20 seq32636 109 4e-19 seq33871 107 1e-18 seq410 96.9 2e-15 seq36087 95.1 8e-15 >seq27463 Length=372575 Score = 159 bits (176), Expect = 2e-34 Identities = 176/233 (76%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 23606 TTAA-AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664 |||| ||||||||| |||||||||||||||||||| ||||| || || | || ||||| Sbjct 145871 TTAACAATGCAGATCTTCGTTAAAACCCTCACGGGTAAAACCATAACGTTAGAGGTTGAA 145812 Query 23665 TCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 || | |||||| | |||| ||||| |||||| |||||||| || | || ||| Sbjct 145811 GCCTCTGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCACCA 145752 Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784 ||||| || | || || || ||||||||||| ||||||| | ||||||||| || Sbjct 145751 GATCAGCAAAGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTTTGTCGGAC 145692 Query 23785 TACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||||| || || || || ||| | || || ||||| ||| | |||||||| Sbjct 145691 TACAACATCCAGAAGGAATCAACACTTCACTTGGTTTTGAGGCTTCGAGGAGG 145639 >seq33159 Length=163697 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| |||||||| || || || || || ||||| | || || || | | Sbjct 97247 AATGCAGATTTTTGTTAAAACACTAACAGGGAAGACTATCACATTAGAGGTGGAACCATC 97306 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| ||||| | ||||||| || || ||||| | || ||||||| Sbjct 97307 AGACACCATTGAGAATGTTAAAGC-AAAAATTCAAGATAAGGAAGGCATTCCCCCAGATC 97365 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || ||| | || ||||| || || || || ||||| | ||||| | ||| |||| Sbjct 97366 AGCAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCCGACTACA 97425 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | || |||||||| || ||| | || || || | | ||| ||||||| Sbjct 97426 ATATTCAAAAAGAATCTACACTTCACTTGGTGCTCCGTTTGAGAGGAGG 97474 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||| | || || || || ||||| | |||||||| || | Sbjct 97020 ATGCAGATTTTCGTCAAAACCTTGACTGGGAAGACCATCACATTGGAAGTTGAACCCTCC 97079 Query 23671 GACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| |||| |||| | || || || || ||||| | || ||||| || Sbjct 97080 GACACAATTGAAAATGTTAAGGC-GAAGATCCAAGATAAGGAAGGCATTCCCCCAGACCA 97138 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||||||||| |||| || | ||| || || || ||||| Sbjct 97139 GCAGAGGTTGATCTTTGCCGGCAAACAGTTGGAGGATGGACGTACATTGTCAGACTACAA 97198 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || || || | || ||||| | | || |||||||| Sbjct 97199 TATCCAGAAGGAATCTACTCTTCACTTAGTCCTCCGTTTAAGAGGAGGA 97247 >seq21507 Length=372 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| || || |||||||| || ||||| || Sbjct 19 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTAGAGGTTGAGCCC 78 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| | ||| ||||| ||||| || || | || |||||| Sbjct 79 TCCGATACCATCGAAAATGTGAAAGCCAAAATCCAAGACAAGGAGGGAATCCCCCCAGAT 138 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | ||||| ||||| || ||||| || ||||||| ||||| | || ||| Sbjct 139 CAGCAAAGGTTAATCTTTGCGGGTAAACAGCTAGAAGACGGCCGCACACTCTCAGACTAC 198 Query 23788 AACATACAAAAAGAGTCCAC 23807 || || || |||||||| || Sbjct 199 AATATCCAGAAAGAGTCTAC 218 >seq32636 Length=346 Score = 109 bits (120), Expect = 4e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || |||||||| || ||||| ||||| | ||||| || | | Sbjct 95 AATGCAAATCTTCGTGAAGACCCTCACTGGTAAAACCATCACCTTGGAAGTGGAGCCTTC 154 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | |||| || || ||||| ||||| | || ||||| || Sbjct 155 GGACACCATTGAGAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 214 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||||||||||||||| | ||||| | ||| || || Sbjct 215 GCAGCGTCTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACCCTGTCCGACTATAA 274 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 275 CATCCAGAAGGAGTCCAC 292 >seq33871 Length=3159 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||||||||| || || ||||| ||||| | ||||| || | | Sbjct 3125 ATGCAGATCTTCGTTAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTGGAACCTTCA 3066 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | ||||| ||||| ||||| | || ||||| || Sbjct 3065 GACACCATTGAGAATGTCAAAGC-TAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCA 3007 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || |||||||| || || ||||| | |||||| | || ||||| Sbjct 3006 GCAGAGGTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTCTCTGACTACAA 2947 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 2946 CATCCAGAAGGAGTCTAC 2929 >seq410 Length=311 Score = 96.9 bits (106), Expect = 2e-15 Identities = 99/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 23606 TTAA-AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664 |||| ||||||||| |||||||||||||||||||| ||||| || || | || ||||| Sbjct 130 TTAACAATGCAGATCTTCGTTAAAACCCTCACGGGTAAAACCATAACGTTAGAGGTTGAA 71 Query 23665 TCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 || | |||||| | |||| |||||| |||||| |||||||| || | || ||| Sbjct 70 GCCTCTGACACTATCGAAAATTTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCACCA 11 Query 23725 GATCAACA 23732 ||||| || Sbjct 10 GATCAGCA 3 >seq36087 Length=321 Score = 95.1 bits (104), Expect = 8e-15 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 23613 GCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGA 23672 |||||| || || ||||| || ||||| || || ||||| | ||||| || | | || Sbjct 1 GCAGATCTTTGTGAAAACGCTTACGGGCAAGACCATCACGTTGGAAGTGGAGCCATCTGA 60 Query 23673 CACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACA 23732 |||| |||||| | || ||||| ||||| || || | || || || || || Sbjct 61 CACTATTGAAAATGTGAAGGCTAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAGCA 120 Query 23733 GCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACAT 23792 ||| | || || || || ||||| || || || | |||||| | || ||||| || Sbjct 121 GCGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCTGACTACAATAT 180 Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || |||||||| | ||||||||||| || ||||||| || Sbjct 181 CCAGAAGGAGTCCACTCTGCATTTAGTTTTGAGACTGCGAGGTGG 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337760494318760