Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq18898 167 6e-36 seq36087 150 4e-31 seq33159 149 1e-30 seq32636 145 2e-29 seq21507 132 1e-25 seq33871 129 1e-24 seq24619 118 3e-21 seq16804 118 3e-21 seq24745 87.8 4e-12 >seq18898 Length=402 Score = 167 bits (184), Expect = 6e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || ||||| || |||| |||||| |||| | ||| Sbjct 82 ACGAAGACGTAGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGT 141 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| |||||||| || || || || ||||| || |||||||| Sbjct 142 GCGACCATCTTCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACC 201 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||||||| |||||| ||||| |||| ||| || || | Sbjct 202 CTCCTTGTCTTGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAG 261 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||| | || || | || | ||||||||| Sbjct 262 GGTGATTGTCTTTCCCGTTAGGGTCTTCACAAAAATTTGCATTTT 306 >seq36087 Length=321 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || ||||||| || | || |||||||| || || |||| |||||| || | | ||| Sbjct 219 CGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTG 160 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || ||||||||||| ||||| || ||||| || || || || Sbjct 159 CGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCC 100 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||||||||| || ||||||| ||| || ||||| || | ||||| || ||| Sbjct 99 TCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACTTCCAAC 40 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||||||||| | ||||| Sbjct 39 GTGATGGTCTTGCCCGTAAGCGTTTT 14 >seq33159 Length=163697 Score = 149 bits (164), Expect = 1e-30 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || ||||||||||| | |||||| |||| | || | |||||| Sbjct 97459 AGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAAAGTGTGCGACCATCT 97400 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || |||||||| ||||| || || || ||||| |||||||| ||| Sbjct 97399 TCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTATCT 97340 Query 225622 TGGATCTTTTGCTTCA-CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || || |||||||| | || || ||||||||||| | |||||| ||||| ||||| || Sbjct 97339 TGAAT-TTTTGCTTTAACATTCTCAATGGTGTCTGATGGTTCCACCTCTAATGTGATAGT 97281 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| || || | ||||| | || | |||||| Sbjct 97280 CTTCCCTGTTAGTGTTTTAACAAAAATCTGCATT 97247 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| ||||| ||||| || |||| |||||| || | ||| || | ||||| Sbjct 97231 AGGACTAAGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCTGACAATGTACGTCCATCC 97172 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||| || || || ||||| | | || ||||| || ||||| |||||||| ||| Sbjct 97171 TCCAACTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCT 97112 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||| || ||||| |||| ||| || || || ||||| ||| Sbjct 97111 TGGATCTTCGCCTTAACATTTTCAATTGTGTCGGAGGGTTCAACTTCCAATGTGATGGTC 97052 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| ||||| | ||| | ||||| Sbjct 97051 TTCCCAGTCAAGGTTTTGACGAAAATCTGCAT 97020 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 ||||| ||||| || || |||| || || || | | || | |||||||||| |||| Sbjct 97678 TGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGAGAGTGTGCGTCCATCTTCTAACTGC 97619 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| | ||||| ||||| || |||||||||||||| || ||||| || Sbjct 97618 TTGCCAGCAAAGATCAACCGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATTTTA 97559 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| |||||||| || || | ||| || |||| ||||| ||||| |||||| Sbjct 97558 GCCTTGACATTCTCGATGGTATCCGAAGGTTCAACTTCTAGGGTGATGGTCTTACCCGTC 97499 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 || || || | || | |||||| Sbjct 97498 AAGGTCTTCACAAAGATTTGCAT 97476 Score = 125 bits (138), Expect = 2e-23 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || || || || |||| ||||| || | | || Sbjct 98153 ACGAAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGT 98094 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||||||||||| || |||||||| | | || ||||| || ||||| || Sbjct 98093 GCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCC 98034 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||||| ||||| ||| || |||||| || |||||||| |||| || || || | Sbjct 98033 TTCCTTGTCCTGGAT-TTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCA 97975 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || ||||| ||||||| ||| | ||||| Sbjct 97974 GAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | |||||| || || || || |||| ||||| || | | || Sbjct 97925 ACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGT 97866 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||||||||||| || |||||||| | | || ||||| || |||||||| Sbjct 97865 GCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACC 97806 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| || || ||| ||| ||| || || || || | || || || || Sbjct 97805 CTCCTTGTCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAA 97746 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || |||| ||||||| || | ||||| Sbjct 97745 TGTGATGGTTTTACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 >seq32636 Length=346 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| ||||||||||| ||||| || || |||| || || |||| || || Sbjct 317 ACGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGT 258 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || ||||||||||| || || || ||||| || ||||| || Sbjct 257 GCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCC 198 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||| ||| || |||||||| || | ||||| || || Sbjct 197 TTCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAA 138 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || || || || | || || | ||| | ||||||| Sbjct 137 GGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCATT 95 >seq21507 Length=372 Score = 132 bits (146), Expect = 1e-25 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || |||||||| || || ||||| |||| |||||| || | | || | || Sbjct 237 TCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGAGAGTGTGCGGCC 178 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||||||| || || || ||||| | | ||| || || || || || || ||||| Sbjct 177 GTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGGGGATTCCCTCCTT 118 Query 225618 GTCTTGGATCTTTTGCTT-CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676 ||||||||| ||| |||| |||| ||||||||| || |||| || || |||| |||| Sbjct 117 GTCTTGGAT-TTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAACCTCTAGAGTGA 59 Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | ||||||||||| | || || | ||| | ||||| || Sbjct 58 TGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 19 >seq33871 Length=3159 Score = 129 bits (142), Expect = 1e-24 Identities = 164/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || || || || |||| ||||| || | | || Sbjct 2904 ACGAAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGT 2963 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||||||||||| || |||||||| | | || ||||| || ||||| || Sbjct 2964 GCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCC 3023 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||||| ||||| ||| || || ||| || ||||||||||| | |||||| || | Sbjct 3024 TTCCTTGTCCTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCA 3082 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | ||||| || ||||| || | ||||| | ||| | ||||| Sbjct 3083 AGGTGATGGTTTTGCCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq24619 Length=1487 Score = 118 bits (130), Expect = 3e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || |||| | || || ||||| ||| |||| ||||| ||| | ||||| Sbjct 552 CAAATTTATAATACTATTGTCACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATA 611 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || || || |||||||| || || ||||| | || ||||||||| Sbjct 612 CCTATTATAATTGGAGGATTTGGTAATTGATTAGTCCCATTAATACTAGGAGCTCCTGAT 671 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || |||||| | | || || ||||| |||||| ||||||| || || ||| | ||| Sbjct 672 ATAGCATTTCCACGAATAAATAACATAAGATTTTGAATACTACCTCCCTCATTAATACTA 731 Score = 105 bits (116), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || |||||||||||||| ||||||||||| || | |||||||| || || |||| Sbjct 1124 TTCTGGGTGACCAAAAAATCAAAATAAATGTTGGTATAAAATAGGATCACCACCTCCTGC 1065 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||||||||||| |||||||| ||||| ||||||||||| Sbjct 1064 AGGATCAAAAAAAGAAGTATTAAGATTTCGATCAGTTAAAA 1024 Score = 93.3 bits (102), Expect = 1e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 371395 ACTCTCATATTAAATATCGTAGTAATAAAGTTTATAGCGCCTAGAAGAGAAGATATACCT 371454 |||| ||||||| || ||||||||||| || ||||| |||| || ||||| |||||| Sbjct 916 ACTCGTATATTAATAATTGTAGTAATAAAATTAATAGCTCCTAAAATTGAAGAAATACCT 857 Query 371455 GCAAGATGTAAACTAAATATTGCTAAATCGACGGAACCGCCGGAGTGAGCTACAATAGAA 371514 || | ||| | | ||| ||||||||||| || || | || || || | | |||| Sbjct 856 GCTAAATGAAGAGAAAAAATTGCTAAATCAACTGATGCTCCTTGATGGGCAATATTAGAG 797 Query 371515 CTTAACGGCGGGTAAACTGTTCAGCCGGTTC 371545 ||| || || ||||||||||| || |||| Sbjct 796 GATAAAGGTGGATAAACTGTTCATCCTGTTC 766 >seq16804 Length=240 Score = 118 bits (130), Expect = 3e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| ||||| |||||||| || |||||||| |||||||| Sbjct 238 TCCAGCTGTTTACCAGCGAAGATGAGTCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 179 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||| ||||| || || | || || || || ||||| ||| Sbjct 178 TGGATCTTAGCCTTCACATTTTCAATGGTATCAGATGGCTCTACTTCCAAAGTGATGGTC 119 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | ||| || | || | |||||| Sbjct 118 TTGCCAGTAAGAGTCTTCACAAAGATCTGCATT 86 >seq24745 Length=385 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 371401 ATATTAAATATCGTAGTAATAAAGTTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGA 371460 ||||||| || ||||| |||||||| ||||| |||| | ||||| |||||||| | | Sbjct 284 ATATTAATAATTGTAGTGATAAAGTTAATAGCTCCTAAGATTGAAGAAATACCTGCTAAA 225 Query 371461 TGTAAACTAAATATTGCTAAATCGACGGAACCGCCGGAGTGAGCTACAATAGAACTTAAC 371520 || | ||| ||||||||||| || ||| || |||||| | | |||| ||| Sbjct 224 TGAAGGGAAAAAATTGCTAAATCAACAGAAGAACCTTGGTGAGCAATATTAGATGATAAA 165 Query 371521 GGCGGGTAAACTGTTCAGCCGGT 371543 || || ||||||||||| || || Sbjct 164 GGGGGATAAACTGTTCATCCTGT 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191607260366180