Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq55175 203 3e-47 seq33159 96.9 3e-15 >seq55175 Length=171662 Score = 203 bits (224), Expect = 3e-47 Identities = 578/880 (66%), Gaps = 19/880 (2%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || ||||| || ||||||||||| ||| || || || || || || | || | Sbjct 39090 GCTTACTTCGTGGAATGGGGTGTTTACCCACGAAAATTCCCAGTCGATCGTATACCAATT 39149 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 || ||| | | ||| | |||| |||||||||||||| ||||| ||||| |||||||| Sbjct 39150 CCTAATCTGACTCATCTTTTGTATGGTTTTATTCCAATTTGTGGAGGCGATGGCATCAAT 39209 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | || || ||||||||| | ||| | || || || ||| | || || Sbjct 39210 GACAGTTTAAAGGAAATCGAAGGCAGTTTTCAAGCTCTTCAGCGTTCATGCAGTGGCCGT 39269 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || |||||||| || ||||| ||||| |||||| || | ||||| || || || ||| Sbjct 39270 GAAGATTTCAAGGTTTCCATTCACGATCCTTGGGCTGCTCTTCAAAAGCCACAGAAGGGC 39329 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 || | | ||||| || || ||||||||||| ||||| || ||||| | ||| Sbjct 39330 TTGTCTTCTTGGAATGAACCTTACAAAGGCAATTTTGGTCAGCTGATGTCCCTTAAACAA 39389 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500 || | || || ||||||| ||||| ||||| || || ||||| | | || || ||| Sbjct 39390 GCTAGGCCGGACCTTAAAATCCTACCTTCCATTGGGGGCTGGACTCTTGCTGATCC-TTT 39448 Query 109501 TATTTTATGCAC-GATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTT 109559 | || | ||| || | ||| | | | |||||||| || ||| || || | Sbjct 39449 CTTCTTTTTCACTGACAAAGTGAAGCGGGACCGCTTCGTTGATTCTGTGAAAGATTTCCT 39508 Query 109560 ACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGG 109619 ||| ||||| ||||| || || || ||||| |||||||| || || ||||| ||||| Sbjct 39509 TCAAACCTGGAAGTTCTTCGATGGTGTTGACATCGATTGGGAATTCCCTGGCGGTAAGGG 39568 Query 109620 TGCCAATCCGAGTCTCGGCGACGCAACGCGCGACAGCAAAACGTACATTGCGTTGTTAAA 109679 || || || || || | || || | || || ||| | | || Sbjct 39569 AGCTAACCCCGACCTTGGTAGC---CCGAAAGATGGAGAAGTTTATGTTGAACTAATGAA 39625 Query 109680 AGAGTTGCGCGCCATGTTGGACGA-CTTGC-----AAACGGCCACCAACAAAACGTACGA 109733 |||||||||| ||||| |||| ||| | |||||| || ||| ||||| Sbjct 39626 GGAGTTGCGCGAAATGTTAAACGAGCTTTCCGAAGAAACGG---GTAAGAAA---TACGA 39679 Query 109734 ATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTAC-GCGTCGG 109792 | || || ||||| || || | ||||| ||| | || || |||||| ||| | Sbjct 39680 GCTCACCTCAGCTATTAGTGCTGGATGGGATAAGATTCAAGTCGTAGATTACAGCG-AAG 39738 Query 109793 CGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAA 109852 | ||| | ||| ||||| | || || | |||| ||||| |||||||| || ||||| | Sbjct 39739 CCCAAAAGTATATGGACCACATCTTCCTCATGAGTTACGACTTCAAAGGTGCCTGGTCCA 39798 Query 109853 ACACGGACTTAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTGT 109912 || | | || |||| || | | || || || | |||||||| || ||| | Sbjct 39799 ACGACACCCTCGGTCATCAGACTCCCCTATATGCCCCTGCATGGAATCCCAAAGAAACTT 39858 Query 109913 ACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTTA 109972 | || || ||| | | || ||| | | | ||| ||| ||||| || ||| Sbjct 39859 ATACCACTGATTTTGGTGTTAAATATTTACTTGCTCAAGGTGTGAACCCTAAGAAGATTG 39918 Query 109973 TAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGT 110012 | | || ||||| |||||||| ||||||||||| || || Sbjct 39919 TGGTAGGTGTAGCTATGTACGGACGCGGCTGGACTGGTGT 39958 >seq33159 Length=163697 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 101010 TGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGG 101069 |||| |||| ||| | | ||||| ||| | || |||||||||||||||||||| |||| Sbjct 97476 TGCCTCCTCTCAAACGGAGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGG 97417 Query 101070 CCATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTAC 101127 | ||| | || |||||| | || || |||||| | ||||| | ||| || ||| Sbjct 97416 --AAAGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGG 97359 Query 101128 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGT 101187 ||| | |||||| || || ||||||| ||| |||| | | || |||| | || Sbjct 97358 GGGAATGCCTTCCTTATCTTGAATTTTTGCTTTAACATTCTCAATGGTGTCTGATG--GT 97301 Query 101188 T--GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 | || | || ||||| || || || | |||||||| |||||| |||||| Sbjct 97300 TCCACCTCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAACAAAAATCTGCATT 97247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409358888951730