Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq33871 141 2e-28 seq33159 136 9e-27 seq21507 131 4e-25 seq32636 123 6e-23 seq27463 104 5e-17 seq28415 93.3 1e-13 >seq33871 Length=3159 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| |||||||| || ||||||||||| || | | || | |||||||||| Sbjct 2919 CAAG-TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCTA 2977 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| | |||||||||||| | | || |||||||| || || | Sbjct 2978 GCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGA 3037 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||||| |||| | | |||||||| || ||||| | || || ||||||| Sbjct 3038 TTTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGGTTTTGC 3097 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || ||||||| |||||| Sbjct 3098 CAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq33159 Length=163697 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | |||||| |||||||| || ||||||||||| || | | || | ||||| Sbjct 98144 GAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATC 98085 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 |||||| || ||||||||||| | |||||||||||| | | || |||||||| || Sbjct 98084 TTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 98025 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || ||||| ||| ||| |||| | | |||| || ||| ||||| ||||| || || Sbjct 98024 CTGGATTTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGT 97965 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || | || || ||||||| |||||| Sbjct 97964 TTTACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || |||||||| || ||||||||||| || | | || | |||||||||| Sbjct 97910 CAAG-TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGTCCATCTTCTA 97852 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| | |||||||||||| | | || || ||||| ||||||| Sbjct 97851 GCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAA 97792 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| | || | | || ||| ||| ||||| | || || ||||| | Sbjct 97791 TTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTTTTAC 97732 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || |||| |||||| Sbjct 97731 CAGTCAGTGTTTTTACAAAGATCTGCAT 97704 Score = 107 bits (118), Expect = 4e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| |||||||| || ||||||||||| || | | || | ||||| || | Sbjct 96998 CAAG-TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTACGACCATCCTCCA 96940 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||||||||| | |||||||||||| | | || || ||||| || || | Sbjct 96939 GCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGA 96880 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| | || | |||| ||| ||| || || | || ||||| |||| Sbjct 96879 TCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGTGATAGTCTTGC 96820 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||||| || | |||||| || Sbjct 96819 CGGTCAATGTCTTCACAAAAATCTGCATCTT 96789 Score = 107 bits (118), Expect = 4e-18 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| ||||| |||||||| || ||||| |||| | || | |||||||| | Sbjct 97454 CAAG-TGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAAAGTGTGCGACCATCTTCGA 97396 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || |||||||| | ||||| || | | || |||||||| ||||||| Sbjct 97395 GCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTATCTTGAA 97336 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| ||| ||| |||| | | ||||||| || || || | || ||||| || | Sbjct 97335 TTTTTGCTTTAACATTCTCAATGGTGTCTGATGGTTCCACCTCTAATGTGATAGTCTTCC 97276 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || || || || || | ||||||| Sbjct 97275 CTGTTAGTGTTTTAACAAAAATCTGCATT 97247 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | ||||||||||| || || ||||| ||||| || | || || | ||||| Sbjct 97232 GAGGACTAAGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCTGACAATGTACGTCCATC 97173 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || | ||| ||||| ||||| | |||||||||||| | | || |||||||| || Sbjct 97172 CTCCAACTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATC 97113 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||| | || | |||| || || ||||| | || || || Sbjct 97112 TTGGATCTTCGCCTTAACATTTTCAATTGTGTCGGAGGGTTCAACTTCCAATGTGATGGT 97053 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || || ||||| | |||||| Sbjct 97052 CTTCCCAGTCAAGGTTTTGACGAAAATCTGCAT 97020 >seq21507 Length=372 Score = 131 bits (144), Expect = 4e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || || || || ||||||||||| ||||| ||||| || | | || | || Sbjct 237 TCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGAGAGTGTGCGGCC 178 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || ||||| | ||| ||||| || | | |||||| ||||| Sbjct 177 GTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGGGGATTCCCTCCTT 118 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| ||| ||| | || | | | || || ||| || || ||||| || Sbjct 117 GTCTTGGATTTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAACCTCTAGAGTGAT 58 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTAC-CCTTAC 152115 || ||||||||||| ||||| ||||| | |||||| || || |||||| Sbjct 57 GGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGACTCCTTAC 9 >seq32636 Length=346 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || || || ||||| || |||||||| || |||| | || | |||||| Sbjct 307 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATCT 248 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || |||||||| || | ||||||||| | | || |||||||| || Sbjct 247 TCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCC 188 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | | |||| ||| ||| ||||| | || || ||| Sbjct 187 TGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATGGTT 128 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| ||||||||||||| |||||| Sbjct 127 TTACCAGTGAGGGTCTTCACGAAGATTTGCATT 95 >seq27463 Length=372575 Score = 104 bits (114), Expect = 5e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || || ||||||||||| || | ||||| | |||||||| | Sbjct 145659 CAAG-TGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAAAGTGCGTCCATCTTCCA 145717 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| ||||||||||| | || ||||| || | | || || || || ||||||| Sbjct 145718 ACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCCTCTTTGTCTTGAA 145777 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | |||| || || || || | || || ||||| | Sbjct 145778 TTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTAACGTTATGGTTTTAC 145837 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||| || || ||||||| ||||||| Sbjct 145838 CCGTGAGGGTTTTAACGAAGATCTGCATT 145866 >seq28415 Length=359998 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 151979 CCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTAC 152038 |||||||||||||| | |||||| ||||| || ||||| || ||||||| |||| | Sbjct 102237 CCTCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGAATCTTAGCTTTGACATTCTCGAT 102296 Query 152039 GCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGAC 152098 | | || || || || || || || || ||||| ||||||||||| |||||||| | Sbjct 102297 GGTATCCGAGGGTTCAACCTCGAGGGTGATGGTTTTCCCCGTGAGAGTTTTCACGAAAAT 102356 Query 152099 CTGCATTTT 152107 |||||| || Sbjct 102357 CTGCATCTT 102365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152926852095370