Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq20129 132 4e-26 seq26923 105 6e-18 seq33159 98.7 8e-16 seq27267 89.7 4e-13 >seq20129 Length=608 Score = 132 bits (146), Expect = 4e-26 Identities = 189/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 104975 ATGCCCGGCCCTATACACCCTAAATACGGCTCCGAGTCTGCACGTTTAAAAACTTTTGAG 105034 ||||||||||| | ||||| |||| |||||| | || ||| | || || | Sbjct 2 ATGCCCGGCCCCGTGCACCCCCGGTACGCCTCCGAAGCGGCGCGTCTTCGCACCTTCAAA 61 Query 105035 GATTGGCCACTTAGTTTAAAACAAAGGCCAGAGCAATTGGCCGAAGCCGGTTTTTACTAC 105094 || ||||| | || | || |||| || || ||||||| ||||||||||| | |||| Sbjct 62 GACTGGCCGCGGTGTATGAAGCAAAAACCCGAAGAATTGGCGGAAGCCGGTTTCTTCTAC 121 Query 105095 ACCGGCAAAGGTGATAAAGTCAAATGTTTTTATTGCGACGGCGGCCTTAAGGATTGGGCA 105154 |||||| | || || ||| ||||| || || |||||||| ||||| || || |||| Sbjct 122 ACCGGCCACGGAGACAAAACGAAATGCTTCTACTGCGACGGTGGCCTGAAAGACTGGGAG 181 Query 105155 AACGCCGACGAACCGTGGGAGGAACATGCACGTTGGTTTGATCGCTGTTCGTTCGTAAAA 105214 |||| ||||| || |||||| | || || || ||||| || | || | | ||| || Sbjct 182 AACGACGACGTCCCATGGGAGCAGCACGCGCGCTGGTTCGACAGATGCGCTTACGTTCAA 241 Query 105215 CTGGTCAAAGGACACGACTACGTGCA 105240 ||||| || || | ||||||||| || Sbjct 242 CTGGTAAAGGGCCGCGACTACGTTCA 267 >seq26923 Length=415599 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 104734 CAACGGGTTCTACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGA 104793 |||||| ||||| || | || || | |||||||| || ||||| || || ||||| || Sbjct 192578 CAACGGCTTCTATTACCTCGGCCGTGGCGACGAAGTTCGTTGCGCCTTTTGTAAAGTCGA 192637 Query 104794 AATAATGCGCTGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACA 104853 ||| ||||||||| | |||||||||||||| || ||| || | || ||||| ||||| Sbjct 192638 AATCATGCGCTGGGTCGAGGGCGACGACCCTGCGAAAGACCACCAGCGTTGGGCCCCACA 192697 Query 104854 GTGCCCGTTTTTGCGA 104869 || ||||||||| || Sbjct 192698 ATGTCCGTTTTTGAGA 192713 >seq33159 Length=163697 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||| ||||| | || || || || || || | || |||||| Sbjct 97247 AATGCAGATTTTTGTTAAAACACTAACAGGGAAGACTATCACATTAGAGGTGGAACCATC 97306 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | ||| | || ||| ||||||| || || |||||| ||||| ||||| Sbjct 97307 AGACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGATCA 97366 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111276 ||| | ||||| | |||||| || || | |||||| || | ||| | |||| || Sbjct 97367 GCAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTT--CCGACTAC 97424 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 ||||| ||||||||||||||||| || || ||| | ||| || | || |||| Sbjct 97425 AATATTCAAAAAGAATCTACACTTCACTTGGTGCTCCGTTTGAGAGGAGGCA 97476 >seq27267 Length=86652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 107558 GTTGCCCAAATCGCCGACGTGACGCTCCGCGGCGTCGGGCGCGCCATGCTGCTGATGCGT 107617 |||||| | ||||| ||||| ||| | | |||| ||| || || |||| ||| | | Sbjct 7015 GTTGCCGAGGTCGCCAACGTGGCGCACGGTGGCGGTGGGTGCACCGTGCTCCTGCTTGTT 6956 Query 107618 AGGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGTGTCGCCAAATTCGTGCAC 107677 || || ||||| |||| || ||||||||||| || | ||||||| ||||||||||| Sbjct 6955 GGGGTTGAAGTGAGCGCCGGCGGACGTGCACCCGTTTGTATTGTCGCCGAATTCGTGCAC 6896 Query 107678 GTGAAAACCGTG 107689 ||| || ||||| Sbjct 6895 GTGGAAGCCGTG 6884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421500334372720