Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq55175 206 2e-48 seq32636 143 2e-29 seq18898 131 1e-25 seq33871 125 5e-24 seq33159 118 8e-22 seq21507 116 3e-21 seq27463 109 4e-19 >seq55175 Length=171662 Score = 206 bits (228), Expect = 2e-48 Identities = 632/972 (65%), Gaps = 25/972 (3%) Strand=Plus/Minus Query 5954 TGTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGA 6013 |||| || || ||||| | | ||| | ||| ||||| || || ||||| |||| |||| Sbjct 40044 TGTAATCAACAACACCATCCTGCCATGTACCTTTTACTGGTCCTGTGGCGTTGCCAGTGA 39985 Query 6014 AGGGATTGTTG--TTGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCAC 6071 | |||||||| || | | ||| | ||| ||| || | |||||||| || || Sbjct 39984 ATGGATTGTTACCTTCATAACCGTGTACA--CCAGTCCAGCCGCGTCCGTACATAGCTAC 39927 Query 6072 GCCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGC 6131 || ||||| | || || |||||||| | ||| || | || || | || | Sbjct 39926 ACCTACCACAATCTTCTTAGGGTTCACACCTTGAGCAAGTAAATATTTAACACCAAAATC 39867 Query 6132 GGTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAG 6191 ||||| || |||| |||| ||||||| || || || ||||| ||||| | || || Sbjct 39866 AGTGGTATAAGTTTCTTTGGGATTCCATGCAGGGGCATATAGGGGAGTCTGATGACCGAG 39807 Query 6192 ATCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATA 6251 | ||| |||||||| || ||||| ||||| |||||| ||| || || |||| ||| Sbjct 39806 GGTGTCGTTGGACCAGGCACCTTTGAAGTCGTAACTCATGAGGAAGATGTGGTCCATATA 39747 Query 6252 CTCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCT 6311 || || | | | ||| ||||| || | || || || | || | || || || Sbjct 39746 CTTTTGGGCTTCGCTGTAATCTACGACTTGAATCTTATCCCATCCAGCACTAATAGCTGA 39687 Query 6312 TGTGAGCAGATACTTGCGACCCGTGCGAGTCTCCAGAC----CGTCCAGCATGGACCTGA 6367 |||||| || || |||||| ||| | || ||| | ||| | | Sbjct 39686 GGTGAGCTCGTATTTCTTACCCGTT----TCTTCGGAAAGCTCGTTTAACATTTCGCGCA 39631 Query 6368 GGTCGCCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGAT 6427 || || || | ||| | || || | | | | || | | | || | Sbjct 39630 ACTCCTTCATTAGTTCAACATAAACTTCTCCATC---TTTCGGGCTACCAAGGTCGGGGT 39574 Query 6428 TGGCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAG 6487 | |||||||| || || || ||||||||||| ||||| || || |||||||||||||| | Sbjct 39573 TAGCTCCCTTACCGCCAGGGAATTCCCAATCGATGTCAACACCATCGAAGAACTTCCAGG 39514 Query 6488 TTTCCAGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAGCT 6547 ||| || || |||| || || ||||| | | || | |||| ||| Sbjct 39513 TTTGAAGGAAATCTTTCACAGAATCAACGAAGCGGTCCCGCTTCACTTTGTCAGTGAAAA 39454 Query 6548 GGTAAAAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGATGCGGAT 6607 | | || ||||| || ||||| || || || || || ||||| | || | ||| Sbjct 39453 AGAAGAAAGGATCAGCAAGAGTCCAGCCCCCAATGGAAGGTAGGATTTTAAGGTCCGGCC 39394 Query 6608 TGTGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA-----CATTTCCGAGTA 6662 | || | | || ||| |||||||| ||||| || ||||| |||| || || | Sbjct 39393 TAGCTTGTTTAAGGGACATCAGCTGACCAAAATTGCCTTTGTAAGGTTCATT-CCAAGAA 39335 Query 6663 GGCCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCTT 6722 | | | ||||||||| || ||||| || || |||| |||||| ||||| ||||| Sbjct 39334 GAC----AAGCCCTTCTGTGGCTTTTGAAGAGCAGCCCAAGGATCGTGAATGGAAACCTT 39279 Query 6723 GAAGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTTT 6782 ||| || || || || ||| || ||||| ||||||| || ||| | | || Sbjct 39278 GAAATCTTCACGGCCACTGCATGAACGCTGAAGAGCTTGAAAACTGCCTTCGATTTCCTT 39219 Query 6783 CAGAGCGTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGTGT 6842 | | ||| ||||| ||||| ||||| || || || | || || |||| ||||| || Sbjct 39218 TAAACTGTCATTGATGCCATCGCCTCCACAAATTGGAATAAAACCATACAAAAGATGAGT 39159 Query 6843 GAGATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACTCCAC 6902 ||||| ||||| || || | ||| | || || | || |||||||||||| ||||| Sbjct 39158 CAGATTAGGAATTGGTATACGATCGACTGGGAATTTTCGTGGGTAAACACCCCATTCCAC 39099 Query 6903 GAAGTAAGCTCC 6914 |||||||||||| Sbjct 39098 GAAGTAAGCTCC 39087 >seq32636 Length=346 Score = 143 bits (158), Expect = 2e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | || ||| ||||| || ||| |||||| |||||||| || Sbjct 329 TTGCATTCCACCACGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATA 270 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| || ||| | || ||||| || || || || ||||||| ||||||||| || Sbjct 269 GTCGGACAGGGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTC 210 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | |||||||| ||| |||||| ||| | | | |||||||| | | Sbjct 209 TGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGG 150 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||| || || || || || |||||||||||||||||||||||||| Sbjct 149 CTCCACTTCCAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCAT 96 >seq18898 Length=402 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| || ||||| ||||| ||||| |||| || ||| | || || Sbjct 94 CACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCTTC 153 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || || |||| ||||||||| || | ||| | ||| ||||| || Sbjct 154 CAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTG 213 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| || | || ||||| | || ||| ||||| | || || ||||| Sbjct 214 GATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTCTT 273 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| ||||||||||| || |||||||| Sbjct 274 TCCCGTTAGGGTCTTCACAAAAATTTGCAT 303 >seq33871 Length=3159 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| || |||||| ||||||||||| || | |||| ||| | || || Sbjct 2916 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTC 2975 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| |||||||| | |||||| |||| || | |||||||| ||| Sbjct 2976 TAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTG 3035 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || || |||| | ||| | |||||||| | | |||||| |||| || || || | Sbjct 3036 GAT-TTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGGTTT 3094 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || ||||| || |||||||| ||||| Sbjct 3095 TGCCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq33159 Length=163697 Score = 118 bits (130), Expect = 8e-22 Identities = 162/224 (72%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| || |||||| ||||||||||| || | |||| || | || || Sbjct 97001 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTACGACCATCCTC 96942 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || ||||| |||||||| | |||||| |||| || | || ||||| ||| Sbjct 96941 CAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 96882 Query 44248 TATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| |||| || || | || ||||| | | |||||||||| || || |||| Sbjct 96881 GATCTT-AGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGTGATAGTCT 96823 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAATGAAA 44350 | || || | |||||||| || || ||||| ||||| || || Sbjct 96822 TGCCGGTCAATGTCTTCACAAAAATCTGCATCTTGTGATTGTAA 96779 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||||| || |||||| ||||||||||| || | |||| ||| | || || Sbjct 98141 CACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTC 98082 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| |||||||| | |||||| |||| || | |||||||| ||| Sbjct 98081 TAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTG 98022 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || || |||| | ||| | |||||||| | || || || |||| || || || | Sbjct 98021 GAT-TTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGTTT 97963 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | ||| || |||||||| ||||| Sbjct 97962 TACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 44135 TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGC 44194 || || ||| |||||| |||||||| || || | |||| ||| | || || | |||| Sbjct 97678 TGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGAGAGTGTGCGTCCATCTTCTAACTGC 97619 Query 44195 TTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTC 44254 || || ||||||||||| || ||||| |||| || | ||||||||| ||| || || Sbjct 97618 TTGCCAGCAAAGATCAACCGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATTTTA 97559 Query 44255 TGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTG 44314 ||| | | | ||||| || | | ||| || || | || || ||||| ||||| Sbjct 97558 GCCTTGACATTCTCGATGGTATCCGAAGGTTCAACTTCTAGGGTGATGGTCTTACCCGTC 97499 Query 44315 AGGGTCTTCACGAAGATTTGCATG 44338 | ||||||||| |||||||||||| Sbjct 97498 AAGGTCTTCACAAAGATTTGCATG 97475 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||| | | | || | |||||| || ||||| ||||| ||||| || Sbjct 97250 CATTCCTCCTCTTAAACGGAGGACTAAGTGAAGAGTAGATTCCTTCTGGATATTGTAGTC 97191 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | | || | || |||| ||| || |||||||||||||| | |||||| |||| Sbjct 97190 TGACAATGTACGTCCATCCTCCAACTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGG 97131 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| || |||||| ||| | || | || ||||||| || ||| Sbjct 97130 GGGAATGCCTTCCTTATCTTGGATCTTCGCCTTAACATTTTCAATTGTGTCGGAGGGTTC 97071 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || ||||| || || | ||| || ||||| || ||||| Sbjct 97070 AACTTCCAATGTGATGGTCTTCCCAGTCAAGGTTTTGACGAAAATCTGCAT 97020 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || |||||| ||||||||||| || | |||| ||| | || || Sbjct 97913 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGTCCATCTTC 97854 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| |||||||| | |||||| |||| || | ||| ||||| || Sbjct 97853 TAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTG 97794 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||| | || | || || || | | || || |||| || || || || Sbjct 97793 AATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTTTT 97734 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || || ||||| ||||| Sbjct 97733 ACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 >seq21507 Length=372 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | || ||| | ||||||||| || || ||| || ||||| ||||| || | | Sbjct 248 CCACCGCGCAATCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGAG 189 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| ||| |||| || ||||| || || |||||||| || | |||||||||| || Sbjct 188 AGTGTGCGGCCGTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGGGG 129 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| || || || |||| || | ||||| |||| || || ||| Sbjct 128 ATTCCCTCCTTGTCTTGGATTTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAACC 69 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || ||||| |||||||||||||| ||||| || ||||| Sbjct 68 TCTAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 22 >seq27463 Length=372575 Score = 109 bits (120), Expect = 4e-19 Identities = 164/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 44107 CATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 |||| || |||| || ||||| |||| |||||| || ||||| ||||||||||| | Sbjct 145634 CATTACCTCCTCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGT 145693 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | | ||| | || |||| ||| || ||||| |||||||| | |||||||||| Sbjct 145694 CCGACAAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTG 145753 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | || || || || || ||| || | || | || ||||| | || || Sbjct 145754 GTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTT 145813 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | ||| || || || ||||||||||| || |||||||| ||||| Sbjct 145814 CAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 145865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359725094949990