Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq33159 140 3e-28 seq32636 131 2e-25 seq33871 125 7e-24 seq18898 118 1e-21 seq27463 96.9 3e-15 seq28415 89.7 5e-13 seq21507 84.2 2e-11 >seq33159 Length=163697 Score = 140 bits (154), Expect = 3e-28 Identities = 174/237 (73%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 41626 TACATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTT 41685 |||| ||| ||||| || ||||| | ||||| ||| || || ||||||||| ||||| Sbjct 98167 TACAGCACA-CCGCCACGAAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTT 98109 Query 41686 ATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTG 41745 ||||| ||||| ||||| | || || ||||||||||||||||| |||| | ||| || Sbjct 98108 GTAGTCAGAGAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTG 98049 Query 41746 GTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCT 41805 ||| | ||||| || ||||||||| |||||| |||| | | ||||| Sbjct 98048 GTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCTTTCACATTCTCAATGGTGTCCGA 97989 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||| || |||| || || |||||||| |||| || |||||||| |||||||| Sbjct 97988 GGGCTCGACTTCCAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | ||||| || || || ||||||||| ||||| ||||| ||| Sbjct 97018 CCTCCACGTAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAG 96959 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||| ||||||||||| |||| | ||| ||||| | |||| Sbjct 96958 AGTGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 96899 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || |||| ||| | | ||||| | |||||| Sbjct 96898 ATGCCCTCCTTGTCC-TGGATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCAC 96840 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| || || || || || |||| ||||| || ||||||||||| || Sbjct 96839 CTCCAAGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCATCTT 96789 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| ||||| ||| Sbjct 97930 CCACCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAG 97871 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| |||| | ||| ||||| | |||| Sbjct 97870 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 97811 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| |||| || | ||| | | ||| || | ||| || Sbjct 97810 ATACCCTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAAC 97752 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || |||||||| ||||| || ||||| || |||||||| Sbjct 97751 TTCCAATGTGATGGTTTTACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || | ||| || ||| ||||||||| ||||||||||| ||| Sbjct 97702 CCACCACGCAGACGGAGTACTAAATGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGAG 97643 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||||||||| || || |||| || || ||||| | |||| Sbjct 97642 AGTGTGCGTCCATCTTCTAACTGCTTGCCAGCAAAGATCAACCGTTGCTGGTCTGGGGGA 97583 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | | ||||| ||| |||||| Sbjct 97582 ATACCTTCCTTATCCTGGATTTT 97560 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || || ||||| || |||||||| || ||||| | || ||||||||||| || || || Sbjct 97438 TCTTTTTGAATATTGTAGTCGGAAAGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAG 97379 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GA 41790 || || || || || || | ||||| || ||||| | | ||| ||||||||| ||| Sbjct 97378 ATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTAT-CTTGAATTTTTGCTTTAACATT 97320 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | ||||| | |||||||| | || || || || || || || || || || Sbjct 97319 CTCAATGGTGTCTGATGGTTCCACCTCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAAC 97260 Query 41851 GAAAATCTGCAT 41862 ||||||||||| Sbjct 97259 AAAAATCTGCAT 97248 >seq32636 Length=346 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || ||| ||||||||| |||||||||||||| Sbjct 322 CCACCACGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAC 263 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || || || ||||| ||||| ||||| ||||| ||||| | ||| Sbjct 262 AGGGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGA 203 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||||||||| ||| || ||| | | | ||||| | |||||| Sbjct 202 ATGCCTTCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACT 143 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || |||||||| || || ||||| ||||| || ||||| Sbjct 142 TCCAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCAT 96 >seq33871 Length=3159 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||||| || || || ||||||||| ||||| ||||| ||| Sbjct 2899 CCGCCACGAAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAG 2958 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| |||| | ||| ||||| | |||| Sbjct 2959 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 3018 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| || |||| |||| || | | ||||| | ||||| Sbjct 3019 ATGCCTTCCTTGTCC-TGGATTTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCAC 3077 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || ||||| || || || || || ||||| |||||||| Sbjct 3078 TTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq18898 Length=402 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||||| ||||| || || || |||||||| || || |||||||| Sbjct 77 CCGCCACGAAGACGTAGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAA 136 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||||||||| ||||| ||||| | ||| Sbjct 137 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGA 196 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||||||| ||| || ||||| | |||||| | || ||| Sbjct 197 ATACCCTCCTTGTCTTGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACC 256 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | || || || || ||||| || ||||| || ||||| ||||| || Sbjct 257 TCGAGGGTGATTGTCTTTCCCGTTAGGGTCTTCACAAAAATTTGCATTTT 306 >seq27463 Length=372575 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/197 (72%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| ||||| ||||| || | ||||| | || || | ||| ||||||||||| Sbjct 145675 TCCTTCTGGATGTTGTAGTCCGACAAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAG 145734 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| | || || || | |||| || ||| |||| | ||| |||| |||| || Sbjct 145735 ATCAATCTTTGCTGATCTGGTGGAATGCCCTCTTTGT-CTTGAATTTTCGCTTTTACATT 145793 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | |||||| | || ||||| | |||||| ||||||||||| || || || || Sbjct 145794 TTCGATAGTGTCAGAGGCTTCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAAC 145853 Query 41851 GAAAATCTGCA-TGTTA 41866 ||| ||||||| ||||| Sbjct 145854 GAAGATCTGCATTGTTA 145870 >seq28415 Length=359998 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| | || | |||||| ||||| ||| ||||||||| ||||| ||||| | Sbjct 101770 CGCCACCGCGCAAGCGCAGCACCAGGTGCAGTGTGGACTCCTTCTGGATGTTGTAGTCTG 101829 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCA 41735 |||||||||| | || || ||||||||||| || || |||| Sbjct 101830 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATCA 101871 >seq21507 Length=372 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| | | | |||||| || || || ||| ||||| || || ||||| | Sbjct 250 CGCCACCGCGCAATCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTG 191 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 |||| ||||| |||| || ||||| || || || || || | | || || || | || Sbjct 190 AGAGTGTGCGGCCGTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGG 131 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | | ||||||||| |||||| |||| || | | || ||| | ||| Sbjct 130 GGATTCCCTCCTTGTCTTGGATTTTG-GCTTTCACATTTTCGATGGTATCGGAGGGCTCA 72 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || || || || ||||| || ||||| |||||||||||||| || Sbjct 71 ACCTCTAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461954555964000