Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq46792 98.7 7e-16 >seq46792 Length=1178884 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 || ||||| || ||||| || ||||| |||||||| ||||| ||||| ||||| || Sbjct 183512 GTAACATGTGCTATCATATGTGTCAAAAGTGAATAGCTGGCAATATTAAACGGCACACCC 183453 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACAT-A 101871 | ||||| || || ||||||||||| | ||| | ||||||||| |||| Sbjct 183452 AGTCCCATGTCTGCACTTCTTTGATACATTAAGCAGTTCAATTTTCCATCAGCCACATGG 183393 Query 101872 AAATTGACTTAATAC-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCC 101930 || | ||| || || ||| ||||| || || |||||| | || ||||| |||| Sbjct 183392 AACTGGAC--AAGACAATGGCAAGGAGGTAATGCCATTTGACTAAGATCTGATGGGTTCC 183335 Query 101931 AAGCACACATTAACATCCTTCTATC 101955 | |||||||||| |||||| ||||| Sbjct 183334 ATGCACACATTATCATCCTCCTATC 183310 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAAT-ATAATGT 101591 ||| |||||||| | ||||| |||| |||| || || ||||| |||| |||| |||| || Sbjct 184282 TTATACAGCCATTTCCATTTCAATTTTAGGATGGGGATTATAATTTT-TAATGATAAAGT 184224 Query 101592 CATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651 | || ||| || |||||||| || ||| || | ||||||| ||||||||||| | Sbjct 184223 CTTCATATTTGAAATCATCAATTGATTCAACTTTCCGAGCAAATTCCAGTGTTGGAAATG 184164 Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711 || | || ||| | || ||| | | | | ||||| || | || ||| | || | Sbjct 184163 GTTTTGGTTTTCTCTCTAATTGCTTCTGCAATGGTTCAATATGGTTTAAATATACATGGG 184104 Query 101712 CATCTCCTATAGTATGGATAAACTCTCC 101739 ||| ||| | || || | |||||| || Sbjct 184103 TATCACCTGTGGTGTGCACAAACTCACC 184076 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/178 (71%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 102089 CCTTCATCTCTGTCA-TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATC 102147 || || |||| || | | ||| ||||||| ||| | ||||| || || ||||| ||||| Sbjct 182574 CCCTCCTCTCGGTTAGTGAAACCCAAGTT-ATCAAGAAATGCTCGGGAGCCATTTGCATC 182516 Query 102148 CCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCA 102207 |||||| || | || | | | || ||||||| || || || || || | ||| Sbjct 182515 CCAAATATGAATTCCTTTTTCAGCAAGAACTTTGCTATCTGTTGAACCAGATATCATCCA 182456 Query 102208 CAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 || | ||||||| ||||| || ||||||||| ||||| ||||||||||| ||| Sbjct 182455 TAATAACTCTTCAATTACACCCCTTGTAAATACTCTTTTAGTTGTTAAAAGTGGTAAT 182398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360973003498937