Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq63174 109 1e-18 >seq63174 Length=598887 Score = 109 bits (120), Expect = 1e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 189404 ATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCA 189463 |||||| | || |||| || ||||| |||||||||||| ||| ||||| || | Sbjct 163896 ATATATACAATAGAACAGCTGTCTAAAGCAGAAACTCATGATGATCTGTGGAATGCTGCG 163837 Query 189464 CAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAG 189523 ||| ||||| |||| | |||||| || |||||| | || | || |||||||||| ||| Sbjct 163836 CAACTGCAGTTGGTCAAAGAAGGCAAGATGCATGGCTTCATGCGCATGTATTGGGGAAAG 163777 Query 189524 AAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAAC 189583 || || || |||||||| ||| || || || ||| | | ||| || |||| || Sbjct 163776 AAAATTCTAGAATGGACGCCAACTCCCGAGGATGCTCTTAAATATGCAATACATTTAAAT 163717 Query 189584 AACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 | | ||| |||| |||| |||||||| ||||| | |||| Sbjct 163716 GATCATTACAGTATAGATGGCAGAGATCCTAATGGATATGCAGGT 163672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922467624547480