Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq48068 96.9 3e-15 >seq48068 Length=254185 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 16488 TTTCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATAT 16547 |||||||| ||| |||||| ||||| || | || ||||| || || || | || Sbjct 224886 TTTCTTTGGGATCCCTAATATATGTATCAATCAACAAGGAGTACATCTCAGAGTGTACAT 224827 Query 16548 TCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGT 16607 | ||||| || || ||||| ||||||||| | || ||||| ||||| ||||| Sbjct 224826 TTTCCATAGCGATTTGAAATCCATAAAAGAACCTTGCTTCACCGATTTGAACTTCTTGTG 224767 Query 16608 AAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA 16667 |||| | ||| |||| || || || ||||| ||||| ||| |||||||| || | | Sbjct 224766 AAAATCGCTCTACTAAATTCTCATTTACTATACCATCAGAAGCAGCAAAAAATGCCAACA 224707 Query 16668 TGTGTTTAATAAA 16680 ||||||||||| Sbjct 224706 CATGTTTAATAAA 224694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462146690678200