Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq18715 264 9e-66 >seq18715 Length=1377716 Score = 264 bits (292), Expect = 9e-66 Identities = 655/978 (67%), Gaps = 17/978 (2%) Strand=Plus/Minus Query 35873 TTAGCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACG 35932 || || || | ||| || || || || |||| || ||| ||||| ||| ||||| Sbjct 1370972 TTTGCTATTTCTCTATAATCAACTACACCGTCTTGCCAAGTACCTTTGACAGGTCCAGTC 1370913 Query 35933 GCTACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCG 35992 || |||| |||||||||||| | | | ||||||||| || || ||||| || || ||| Sbjct 1370912 GCGTTGCCAGTGAATGGATTGTTATTTTCGTAGTTGTGAACCCCGGTCCAGCCTCGTCCG 1370853 Query 35993 TACATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTCC 36052 ||||| ||||| |||| ||| | || || || || || | ||| || |||||| | | Sbjct 1370852 TACATAGCTACACCCACCACAATCTTCTTAGGGTTGACGCCTTGAGCAAGCAAATATTTC 1370793 Query 36053 ACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTC 36112 || | | || | ||| || | ||| || || ||||| || | | |||| || | ||| Sbjct 1370792 ACACCAAAGTCAGTGGTATAAGTTTCCTTGGGGTTCCAAGCAGGAGCGTAAAGCGGTGTC 1370733 Query 36113 TGATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATT 36172 ||||||||||| | ||||||||| || ||||| |||||||||||||| | |||||| Sbjct 1370732 TGATGACCGAGGGTGTCATTAGACCAGGCGCCTTTAAAATCATAACTCATGAGGAAAATG 1370673 Query 36173 TTATCTAAATACTGTTGTG-CTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGC 36231 | ||| | || | || | |||| | ||||| ||| | ||||| || ||||| Sbjct 1370672 TGATCCATGTATTTCTGAGCCTCGCT-GTAATCGACCACTTGAATCTTATCCCATCCAGC 1370614 Query 36232 GCTAATCGCTGTGGTGAGTTCTAAAGTACGATTCGTTTGTATTTGAA--CTTGATCGAGC 36289 ||||| || | || || || | | | || | | | ||| | | || | | Sbjct 1370613 ACTAATAGCGGAAGTCAGCTCGTATTTCTTACCGGTCTCT-TCAGAAAGGTCGTTC-AAC 1370556 Query 36290 ATGGCGCGCAATTCGCCCAATAAAGCGA--TATACGTGTTATTGTCGCGTTCCACATCGC 36347 || | |||||||| || ||| | | || || | | ||| | | | | | Sbjct 1370555 ATTTCACGCAATTCCTTCATTAATTCAACGTAAACATCT--CCGTC-CTTAGGGCTT--C 1370501 Query 36348 CAACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGA 36407 | | || || || || || || ||||| || ||||||||||| ||||| | ||||||| Sbjct 1370500 CTAGGTCAGGGTTAGCTCCCTTACCGCCAGGGAATTCCCAATCGATATCAACACCGTCGA 1370441 Query 36408 AAAATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGC- 36466 | || ||||| || | | ||| || ||| || || || || || | ||| | Sbjct 1370440 AGAACTTCCAGGTTAGAAGAAAATCTTTCACAGAATCAACGAAGCGACCTCTC-TTCTCT 1370382 Query 36467 GCATC-GTGCATATGATAGAAGGGATCGGACAGTGTCCAACCGCCGATTGATGCCAACAC 36525 || ||| | | || |||||||||||| || ||||| || ||||| || | | | Sbjct 1370381 TTGTCGGTGAAGAAGA-AGAAGGGATCGGCAAGAGTCCAGCCTCCGATGGAAGGTAGAAT 1370323 Query 36526 TTTTAGATTGGGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGG 36585 ||| || | || |||| ||| | ||| | |||||||| ||||||||||| || Sbjct 1370322 TTTAAGTTCAGGCCTGGCTTGTTTGAGAGACATCAGCTGACCAAAGTTGCCTTTGTATGG 1370263 Query 36586 TTCGTTCCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTAT 36645 ||| ||||| | | || | ||||| || || || || |||||||| ||||| || Sbjct 1370262 TTCATTCCAGGAAGACAGTCCCTTCTGTGGCTTCTGAAGAGCGGCCCACGGGTCGTGAAT 1370203 Query 36646 GGAAACTTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGT 36705 |||||||| |||| || | ||| ||| |||| ||| | |||| ||||| || Sbjct 1370202 AGAAACTTTGAAATCTTCGCGGCCGCTGCATGATCGTTGAAGAGCTTGGAAACTGCCTTC 1370143 Query 36706 GATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAA 36765 ||| |||||||||||||| || ||||| || |||||||| || || || ||||| || Sbjct 1370142 GATCTCCTTTAAACTGTCGTTGATGCCGTCGCCTCCGCAAATAGGAATGAAACCGTACAA 1370083 Query 36766 AATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCC 36825 || |||| || || || | || || || || || || || |||||| || Sbjct 1370082 AAGATGCGTCAGATTAGGAATCGGTACACGATCGACTGGGAATTTTCTTGGGTAAACACC 1370023 Query 36826 CCATTCGACAAAATAGGC 36843 |||||| ||||| || || Sbjct 1370022 CCATTCAACAAAGTACGC 1370005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417981867619040