Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq48068 114 3e-20 >seq48068 Length=254185 Score = 114 bits (126), Expect = 3e-20 Identities = 109/138 (79%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 101902 TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATT 101961 ||||| |||| ||| |||||||||||||| || ||||||||||||||| |||| || Sbjct 225276 TTTGG-GGAAAGAATAGTTGCCTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTAGCTT 225334 Query 101962 CGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 ||||| ||||||||| | ||||| | || | |||||||||| |||| | |||||| Sbjct 225335 TGCATCAATTTTCTGGTTGAAGAAGCGCGGCTTAATGCCTGGTCTGACCTTCAGCAATGA 225394 Query 102022 GTTCATTTCTAGGGACGA 102039 | | ||||||||||| || Sbjct 225395 GCTTATTTCTAGGGATGA 225412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988782849183585