Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq48068 136 4e-27 >seq48068 Length=254185 Score = 136 bits (150), Expect = 4e-27 Identities = 140/181 (77%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 14141 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14200 ||| ||||||||||| | ||| ||||| |||||||||| ||||||||||| || || Sbjct 224870 AATATATGTATCAATCAACAAGGAGTACATCTCAGAGTGTACATTTTCCATAGCGATTTG 224811 Query 14201 AAAACCATAAAAGCATCTAGCTTCCGACCA--TTGTACTTCCGAGTAAAATCTTTCGGCC 14258 ||| ||||||||| | || ||||| ||| ||| ||||| |||||| || | Sbjct 224810 AAATCCATAAAAGAACCTTGCTTC--ACCGATTTGAACTTCTTGTGAAAATCGCTCTACT 224753 Query 14259 AAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAG 14318 ||||| ||||| |||||||||||| ||| |||||||||||||| | | |||||||||| Sbjct 224752 AAATTCTCATTTACTATACCATCAGAAGCAGCAAAAAATGCCAACACATGTTTAATAAAG 224693 Query 14319 T 14319 | Sbjct 224692 T 224692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479349092835800