Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq48068 123 2e-23 >seq48068 Length=254185 Score = 123 bits (136), Expect = 2e-23 Identities = 138/181 (76%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 ||| ||||||||||| | ||| ||||| |||||||||| ||||| ||||| || || Sbjct 224870 AATATATGTATCAATCAACAAGGAGTACATCTCAGAGTGTACATTTTCCATAGCGATTTG 224811 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACC-ATTGTACCTCCGAGT-AAAATCTTTCTGCC 14046 ||| |||||||| | || ||||| ||| ||| | || | || |||||| ||| | Sbjct 224810 AAATCCATAAAAGAACCTTGCTTC--ACCGATTTGAACTTCTTGTGAAAATCGCTCTACT 224753 Query 14047 AAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAG 14106 || || ||||| || ||||||||| ||| |||||||||||||| | | |||||||||| Sbjct 224752 AAATTCTCATTTACTATACCATCAGAAGCAGCAAAAAATGCCAACACATGTTTAATAAAG 224693 Query 14107 T 14107 | Sbjct 224692 T 224692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478210792618680