Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq61578 93.3 3e-14 >seq61578 Length=3623949 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||| || || || ||||||||| || ||||| || || | ||| |||| ||| Sbjct 3475955 ACCAAGTGGAGTGTCGACTCTTTTTGGATGTTATAGTCTGATAGTGTACGACCATCCTCC 3475896 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 || ||||| || || || || | ||||||||||| | || | ||||||||| ||| Sbjct 3475895 AACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATACCTTCTTTGTCTTGG 3475836 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 ||||| ||| || | | | ||| |||| || || || |||| ||||| || || Sbjct 3475835 ATTTTAGCTTTAACGTTCTCGATAGTGTCTGAGGGTTCAACTTCGAGGGTAATAGTCTTG 3475776 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || ||||| || || || ||||| Sbjct 3475775 CCAGTCAAGGTCTTGACGAAGATCTGCAT 3475747 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 |||||| || || || ||| || || || || |||||| | | ||| |||| || Sbjct 3476184 CACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGTGTACGACCATCCTC 3476125 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 ||| ||||| || || || || | ||||||||||| | || | ||||||||| ||| Sbjct 3476124 CAACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATACCTTCTTTGTCTTG 3476065 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||||| ||| || | | | ||| |||| || || || |||| || || || || Sbjct 3476064 GATTTTAGCTTTAACGTTCTCCATAGTGTCTGAAGGTTCAACTTCGAGGGTGATGGTCTT 3476005 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || ||||||||||| || || || ||||| Sbjct 3476004 TCCTGTTAAAGTCTTGACGAAGATCTGCAT 3475975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354504388763676