Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_006646.1 Length=31972 Score E Sequences producing significant alignments: (Bits) Value seq54512 122 2e-23 >seq54512 Length=2028860 Score = 122 bits (134), Expect = 2e-23 Identities = 102/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 22927 TTTGGAATAACTTTTTAATGACTTTACCGATCGATTCCAAAAACTAATCAGCCCTTAACC 22986 ||||||||||||||| | | ||||| ||||| | | |||||||||||| ||| || | | Sbjct 888376 TTTGGAATAACTTTTAACCGGCTTTATCGATCAACTTCAAAAACTAATCCGCCTTTGAGC 888435 Query 22987 TCGAAAAACCACGTCGATTGCCACCGGCCCGGCCAGAATCGGTTGATTCGTTCCGGAGAT 23046 | |||||||||||||||| |||||| | || || || |||||||||||||| ||||| Sbjct 888436 TTGAAAAACCACGTCGATCGCCACCAAGCTGGTCATAAGCGGTTGATTCGTTCGAGAGAT 888495 Query 23047 ATCGT 23051 ||||| Sbjct 888496 ATCGT 888500 Score = 84.2 bits (92), Expect = 4e-12 Identities = 92/122 (75%), Gaps = 9/122 (7%) Strand=Plus/Plus Query 23702 CAGTCAAAAGTTATTGCAGTTTGAAAATTCATAAAATAAGTAGTGTTGGATGAAACTTCT 23761 || |||||||||||||| |||||||||||| |||| | ||||| ||||||||||| Sbjct 888639 CATTCAAAAGTTATTGCGGTTTGAAAATTCCAAAAACA----GTGTTCTATGAAACTTCT 888694 Query 23762 ATCAGACTTTTGAGCTTAAATTAAAAAGCTCAAAAGCGTAGAACAGCTATCTTTTTGAGC 23821 |||||||||| |||| | | |||||||| || ||||| ||| | ||||| | Sbjct 888695 ATCAGACTTTCGAGC-----TGGGAGAGCTCAAATGCATAGAAATATTATTTCTTTGAAC 888749 Query 23822 TC 23823 || Sbjct 888750 TC 888751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102112123080996