Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_006647.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq54512 188 4e-44 >seq54512 Length=2028860 Score = 188 bits (208), Expect = 4e-44 Identities = 141/169 (83%), Gaps = 21/169 (12%) Strand=Plus/Minus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 888888 AAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCCGCTAATTC 888829 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAGTTTTTAAGCTCAAAATATA 8461 ||||||||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct 888828 CATTCCTGGGCTCTTAAAATTGTACTTATGACGTTTTTGAG--------CTCAAAATATA 888777 Query 8462 ATTTATGTGTTATTTTGAGCTCGCTGAGTTCTAAGAAATAATATTTCTA 8510 ||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 888776 ATTTATGTGATATTTTGAGCTCGCTGAGTTCAAAGAAATAATATTTCTA 888728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27976898369732