Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq35308 87.8 4e-13 >seq35308 Length=14702 Score = 87.8 bits (96), Expect = 4e-13 Identities = 349/534 (65%), Gaps = 29/534 (5%) Strand=Plus/Minus Query 4472 ATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTTAG 4531 |||||| || ||| |||||||||| |||| | || |||||| | || |||||| | Sbjct 8410 ATAAAACCAAATATAAAATTCACTATAGAAATCTTAAGCAATGTATCGAATTAGGTATGA 8351 Query 4532 TTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGAC--TGGCTCAAATCATA 4589 | | ||| | || | |||| |||||| | ||| || | ||||| || ||| Sbjct 8350 AAGTAATCAAAGTTCATAGAATCTTAAAATTTAAACAA--AGTCCTTGGCTTAAGAAATA 8293 Query 4590 TATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAG--TTCGaaaaaaaCTTT 4647 ||| ||| |||||| | ||| |||| | || || ||||||||| | ||| Sbjct 8292 TATTGATTTAAATACAAATTTAAGAACCGAAGCT--GTATCAGAATTCGAAAAAGATTTT 8235 Query 4648 TATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAAA 4707 |||||| ||||||||||| | |||||||| || || ||||| ||| | ||||| | Sbjct 8234 TATAAACTAATGAATAATTCTGTTTTTGGTAAAACAATGGAAAATAT-TGAAAAGCGAGT 8176 Query 4708 G-ATATATATTTAAGAACAAAGTGGCAAAGT--CAATACAATGTATCGGATT----TAGT 4760 | || | | ||| |||| | ||| ||| | || || || | ||| | | | Sbjct 8175 GAATGTGAAGTTATTAACACATTGGGAAAATTGGGGTA-AAAGTCTAGGAGTCCAAGACT 8117 Query 4761 ATGTAGACCAAAC-----TTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTT 4815 ||| | |||||| || |||||| | |||| ||| || || | ||| || Sbjct 8116 TTGTTG-CCAAACCTGAATTTCACAGCTTATCAATATTTTCAGAAAATTTAGTTGCGGTG 8058 Query 4816 GAACTTAAAAAAGCTAGAGT-TTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATT 4874 || | | ||| | | | | || | | || || || || || |||| ||| | ||||| Sbjct 8057 CAATTAAGGAAAACGACAATATTTCAT-AATAAACCCATTTACTTAGGATTTTGCATATT 7999 Query 4875 AGATTTATCTAAAATTTATATTTATGACTTTCATTACAA--TTATGTTATGCAAAATTAT 4932 |||| | ||||||| | || || || || || ||||| ||||||| | || | | Sbjct 7998 AGATGTTTCTAAAACTCTAATGTACGAATTCCACTACAAATATATGTTAAG--TAAGTTT 7941 Query 4933 GTAAATACCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAATTT 4986 | |||| | |||| || | || ||||| || || || ||||||||||| || Sbjct 7940 GAGAATAGATTAAAACTACTATATACTGATACTGACAGCTTAATTTACCAAATT 7887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97900885337598