Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq18715 379 2e-100 seq26895 91.5 1e-13 >seq18715 Length=1377716 Score = 379 bits (420), Expect = 2e-100 Identities = 898/1343 (67%), Gaps = 15/1343 (1%) Strand=Plus/Plus Query 55683 CTATGCAACTCGGACGGATGCACTTCGAGTCAAGCGGTCGAAGTTGTAATCGCAGATACG 55742 || |||||||| |||||||| |||| ||| | | || ||||| | || ||||| Sbjct 1369861 CTCTGCAACTCTGACGGATGTTCTTCCAGTGAGCCTACAGAGATTGTAGTAGCTGATACT 1369920 Query 55743 GACGGTTCTCATCTTGCTCCGCTCTATTACGAATATCAGGAATTAAATCAACCTTTCGAA 55802 |||||| ||||| |||| | ||| | || ||| | || ||| || Sbjct 1369921 GACGGTAGCCATCTACCTCCATTGATGTACACCCTTGGAGAGAAGAATAAGCCATTC-AA 1369979 Query 55803 ACGCGAGTCGTGGATAAAATCGTTGCCGCATATTTTGTCGAGTGGGGTGTTTATCATAGA 55862 || |||| ||| ||| | || | || || ||||| || ||||||||||| | ||| Sbjct 1369980 ACA-GAGTTCAGGA-AAAGTTGTCGGAGCGTACTTTGTTGAATGGGGTGTTTACCCAAGA 1370037 Query 55863 AACTTTCCTGTCACTCGAGTTCCCACTCCTAATCTGTCACACATTCTCTACGGATTCATA 55922 || || || ||| ||| || || | |||||||||| | || || | ||||| ||||| Sbjct 1370038 AAATTCCCAGTCGATCGTGTACCGATTCCTAATCTGACGCATCTTTTGTACGGTTTCATT 1370097 Query 55923 CCGATATGCGGCGGCGACGGCATTAACGACAGTCTCAAGACGATAACCGGTAGTTTTGAA 55982 || || ||||| ||||||||||| ||||||||| | ||| ||| || ||||| || Sbjct 1370098 CCTATTTGCGGAGGCGACGGCATCAACGACAGTTTAAAGGAGATCGAAGGCAGTTTCCAA 1370157 Query 55983 GCGCTTCAGCGATCGTGTTCGGGTCGAGACGACTTCAAAGTGTCGATTCATGACCCGTGG 56042 || ||||| ||||| || || || || || |||||||| || ||||| ||||||||| Sbjct 1370158 GCTCTTCAACGATCATGCAGCGGCCGCGAAGATTTCAAAGTTTCTATTCACGACCCGTGG 1370217 Query 56043 GCTGCGGTCCAAAAGCCCCAAAAACAAGTGACCGCATGGAACGAACCATACAAAGGCAAC 56102 || || | || ||||| || || | || | | ||||| |||||||||||||||||| Sbjct 1370218 GCCGCTCTTCAGAAGCCACAGAAGGGACTGTCTTCCTGGAATGAACCATACAAAGGCAAC 1370277 Query 56103 TTTGGACAATTGATGGCAGCTAAACTGGCGAATCCCCATGTTAAAGTGCTGCCTTCGATC 56162 ||||| || ||||| | |||| || | || | ||||| | || ||||| ||| Sbjct 1370278 TTTGGTCAGCTGATGTCTCTCAAACAAGCCAGGCCTGAACTTAAAATTCTACCTTCCATC 1370337 Query 56163 GGTGGCTGGACTTTATCCGATCCGTTCTTTTACTTTCACGATGCGGTCAAACGCAAAATT 56222 || ||||||||| | ||||||| ||||| | ||| ||| | || | Sbjct 1370338 GGAGGCTGGACTCTTGCCGATCCCTTCTTCTTCTTCACCGACAAAGAGAAGAGAGGTCGC 1370397 Query 56223 TTTGTCGATTCTGTCGTCGAGTTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATC 56282 || || |||||||| || ||| | | |||||||| || ||||| ||||| || ||| Sbjct 1370398 TTCGTTGATTCTGTGAAAGATTTTCTTCTAACCTGGAAGTTCTTCGACGGTGTTGATATC 1370457 Query 56283 GACTGGGAGTTTCCCGGCGGAAAGGGGGCCAATTCCAACGTCGGCGATGCCGAACGCGAT 56342 || ||||| || || ||||| ||||| || || | || | | || ||| | | || Sbjct 1370458 GATTGGGAATTCCCTGGCGGTAAGGGAGCTAACCCTGACCTAG--GAAGCCCTAAG-GA- 1370513 Query 56343 CGCAACACGTACACGATTCTGTTACGA--GATTTACGCGAAGCGCTAGACCGA-CTAAGC 56399 || | | || ||| | | | || || || || ||| | | || ||| || Sbjct 1370514 CG-GAGATGTTTACGTTGAATTAATGAAGGAATTGCGTGAAATG-TTGAACGACCTTTCT 1370571 Query 56400 CTCGAAACGAATCGAACATACGAGCTAACCAGCGCCATTAGCGCCGGCGATGACAAAATC 56459 || || | | ||||||||| || ||| ||||| || || || || || Sbjct 1370572 GAAGAGACCGGTAAGAAATACGAGCTGACTTCCGCTATTAGTGCTGGATGGGATAAGATT 1370631 Query 56460 ACGGTCGTCGACTACACAGCCGCTCAAAAATATTTAGATTATAtttttttGATGACATAC 56519 || ||||| |||| | ||||| ||||| | ||| | ||||| | |||| || Sbjct 1370632 CAAGTGGTCGATTACAGCGAGGCTCAGAAATACATGGATCACATTTTCCTCATGAGTTAT 1370691 Query 56520 GATTTTAAAGGCGCTTGGTCGAATAGCGATCTGGGCTATCAGACGACTTTGTACGCGCCT 56579 |||||||||||||| ||||| ||| | || || ||||||| | | ||||| ||| Sbjct 1370692 GATTTTAAAGGCGCCTGGTCTAATGACACCCTCGGTCATCAGACACCGCTTTACGCTCCT 1370751 Query 56580 GCGTTTAATCCTAAAGAACACTATACGACCGATTTTGCGGTTCGTGCTCTGCTTAAACAA 56639 || | || || || ||| ||||| || || |||| || | ||||| ||| Sbjct 1370752 GCTTGGAACCCCAAGGAAACTTATACCACTGACTTTGGTGTGAAATATTTGCTTGCTCAA 1370811 Query 56640 AAAGTCGAGAATAAAAAGATTGTAGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGC 56699 ||| | ||| |||||||| || || |||||||||||||| || || |||||||| Sbjct 1370812 GGCGTCAACCCTAAGAAGATTGTGGTGGGTGTAGCTATGTACGGACGAGGCTGGACCGGG 1370871 Query 56700 GTCGGTGATTTCGTCGACAAAAACAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAA 56759 || | | | ||| || ||||||||||| | |||| || | |||||||||||| Sbjct 1370872 GT---TCACAACTACGAAAATAACAATCCATTCACTGGCAACGCGACTGGACCTGTCAAA 1370928 Query 56760 GGTACCTGGGAAGACGGAGTCGTTGATTTTAGAGAAATTTTCAACTCTTTTGTGACTAAC 56819 ||||| ||| ||||||| || ||||||| ||||||||| || | | | | Sbjct 1370929 GGTACTTGGCAAGACGGTGTAGTTGATTATAGAGAAATAGCAAATGAAATCGCTATGGGC 1370988 Query 56820 AAACCGATGGATCGTTACGATGCTATAGCAAAAGCGTCATACGTTTTTAATAATTCGACA 56879 ||| | | | ||||||| | || |||| | || || || ||||| Sbjct 1370989 AAATGGGAGTTCCATTACGATAACGTTGCTGAAGCTCCTTATGTGTTCCGGCCATCGACC 1371048 Query 56880 GGTGATCTCATCACTTACGACAGTCCCCAGTCGGTTCTGGATAAAGCAAAGTATGTGTTA 56939 ||||| || || || ||||| | ||||| ||| | | | |||| |||||||| | Sbjct 1371049 GGTGACCTAATAACGTACGATAATCCCCGATCGACTATTGCGAAAGGCAAGTATGTAAGA 1371108 Query 56940 GACTACAACTTGGGTGGGTTGTTTGCGTGGGAAATCGATGCAGATAACGGATTACTTTTA 56999 || | || |||| || ||||| |||||||| || |||||||| || || ||| ||| Sbjct 1371109 AACAATAAGCTGGGCGGTTTGTTCGCGTGGGAGATTGATGCAGACAATGGTGAACTATTA 1371168 Query 57000 AACGCAATGAATAGTGGTCTTGG 57022 ||||| ||||| | ||||| || Sbjct 1371169 AACGCCATGAACATGGGTCTCGG 1371191 >seq26895 Length=1000185 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 101022 ACACGGCTTTCATGTTCACGAATTCGGCGACACAAGCAACGGCTGCACGTCTGCGGGCGA 101081 |||||| |||||||| ||||| || || |||| | || || ||||| ||||| || | Sbjct 288779 ACACGGTTTTCATGTGCACGAGTTTGGTGACAACACAAATGGTTGCACATCTGCAGGTGC 288838 Query 101082 ACATTTTAACCCTA-CGGGCATGGCTCACGGCGCACCCAACTCTGCCGTTCGTCACGTCG 101140 || |||||||| | | ||| || || ||||| |||||| | || || |||||||||| Sbjct 288839 CCACTTTAACCCCAACAAGCA-GGAGCATGGCGCCCCCAACGCCGCTGTGCGTCACGTCG 288897 Query 101141 GTGATCTTGGCAATATTGATGC 101162 | || || ||||| ||||| || Sbjct 288898 GCGACCTCGGCAACATTGAAGC 288919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429604909913985