Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq18715 208 7e-49 seq48925 174 1e-38 seq61578 127 2e-24 seq26895 96.9 3e-15 >seq18715 Length=1377716 Score = 208 bits (230), Expect = 7e-49 Identities = 347/496 (70%), Gaps = 4/496 (1%) Strand=Plus/Plus Query 23637 GTCGCCGCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTG 23696 |||| || |||||||| || ||||| || || || ||| |||| || || || || Sbjct 1369999 GTCGGAGCGTACTTTGTTGAATGGGGTGTTTACCCAAGAAAATTCCCAGTCGATCGTGTA 1370058 Query 23697 CCCGTGCCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGA 23756 || | |||||| || | ||| | | ||||| ||| | ||||| ||||| ||||| || Sbjct 1370059 CCGATTCCTAATCTGACGCATCTTTTGTACGGTTTCATTCCTATTTGCGGAGGCGACGGC 1370118 Query 23757 ATTAACGACGCTCTCAAAACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCG 23816 || |||||| | | || | ||||||||| | || || || || || ||| Sbjct 1370119 ATCAACGACAGTTTAAAGGAGATCGAAGGCAGTTTCCAAGCTCTTCAACGATCATGCAGC 1370178 Query 23817 GGCCGCGCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAG 23876 ||||||| || ||||| || || || ||||| |||||||| |||||||||||||| ||| Sbjct 1370179 GGCCGCGAAGATTTCAAAGTTTCTATTCACGACCCGTGGGCCGCTCTTCAGAAGCCACAG 1370238 Query 23877 AAGGGAGTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACG 23936 |||||| |||| | ||||| || || || || |||||||||||| ||||| | Sbjct 1370239 AAGGGACTGTCTTCCTGGAATGAACCATACAAAGGCAACTTTGGTCAGCTGATGTCTCTC 1370298 Query 23937 AAACTGGCGTATCC-GCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGA 23995 |||| || || | |||| ||| | |||||||| ||||| |||||||| || | || Sbjct 1370299 AAACAAGCCAGGCCTGAACTT-AAAATTCTACCTTCCATCGGAGGCTGGACTCTTGCCGA 1370357 Query 23996 TCCGTTTTATCACATGCACGAGCCCAGCGTA-CGCCGTGTGTTTATCGACTCTGTCGAAG 24054 ||| || | || | ||| | || | | | || || | || ||||| ||| Sbjct 1370358 TCCCTTCT-TCTTCTTCACCGACAAAGAGAAGAGAGGTCGCTTCGTTGATTCTGTGAAAG 1370416 Query 24055 AGTTTTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCG 24114 | ||| | |||| ||||| ||||| ||||| || || || |||||||| ||||| |||| Sbjct 1370417 ATTTTCTTCTAACCTGGAAGTTCTTCGACGGTGTTGATATCGATTGGGAATTCCCTGGCG 1370476 Query 24115 GCAAAGGGGCAAATCC 24130 | || || || || || Sbjct 1370477 GTAAGGGAGCTAACCC 1370492 >seq48925 Length=1097090 Score = 174 bits (192), Expect = 1e-38 Identities = 676/1053 (64%), Gaps = 11/1053 (1%) Strand=Plus/Plus Query 144737 GCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAG 144796 || || ||||| |||| ||||| ||||| || ||||| || ||| ||| | ||| Sbjct 839852 GCGGCAGGCTTTATGCGTAAATAATACATTCCTGTTTTCAGACCCATTTTCCATGCGTAA 839911 Query 144797 TCGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGG 144856 ||| |||||||||| | || | || || |||||| | || | |||||| Sbjct 839912 AAGTGAATCGACGTCAATTTTCCATAATTAGGTTCAGCCACATGAATGTTAAACGATTGA 839971 Query 144857 CTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATT 144916 ||||| || || || || | ||| |||||||| | ||| | ||| | || Sbjct 839972 CTTTGGTCTATAAATGCTCCTCTGTCAGCGGCCATTTTAATTGTTGTTTTAACTGAAATC 840031 Query 144917 TCCCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATC 144976 |||||| | || || ||||| | |||| | | || || | ||||| ||||| Sbjct 840032 TCCCAAACTGTTTTATACAACTCTCTAATATCTTTTGGTATACGCTCAATATTTTGAATG 840091 Query 144977 GACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGT-ACAGTTTTAACTTGAT 145035 || || |||| | ||| ||| ||| || ||| | | | | || | Sbjct 840092 GAACCATTGTTGTGTATTATCAGATTCTTCATGTCTT-CGTCCCATAAATCTGCCTGTGT 840150 Query 145036 CAAGTCG-TCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCA 145094 ||||| ||||| || | || || || ||||| || || || | ||| ||||| | Sbjct 840151 TAAGTCTCTCAATAAATGA-TGGTTAACAACCTGGAATTCTCCAGACAAAACACGTCTTT 840209 Query 145095 AATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCG 145154 || | ||| || ||||| |||||||| ||||| ||||| || | |||||| || || | Sbjct 840210 GGTAAATGTTTGATGTGAACGGTTCAAAGGACTCATTATTTCCTAAGATTTGTGCTGTAG 840269 Query 145155 TTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTT 145214 || |||||||| || | | | ||||||||| || || || || || | | Sbjct 840270 ACGCTGTGGGCATTGGAGCTAATAGAAGTGAATTGCGGAGTCCATGTTTGGCAATTTTAT 840329 Query 145215 CCTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCA 145274 | || || || ||| | ||| || ||| || | ||||||||||| || |||| Sbjct 840330 CTTTCAGAATAGACCAGTTCCAGAGATCAGTTGGAGTTTTATCCCACATGTCATATTGCA 840389 Query 145275 AAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGT-AACTGCCCCAAGTTTTG-GC 145332 | ||||| | ||| || || || |||| | | | ||| | |||| ||| ||||| || Sbjct 840390 AGATGCCTTGGCTTGCAGGACTTCCTTCATATGTACTATAAACT--CCCTCTTTTTGCGC 840447 Query 145333 GAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAG 145392 || || ||||| || || | || ||| |||| || || ||| ||||| ||| || Sbjct 840448 CAGTTCACAACTGGCTTCTAATGCTCCGTAATATATGGTTTCGAAGATTTGTTGGTTAAG 840507 Query 145393 CAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCC 145452 || ||||| || || || || || ||||||| |||||||| | ||| || | ||| Sbjct 840508 TTTAATTGCTTCTTCACTTTCATATGGAATGCGCATTAGTACAAATGTATCAGCTAACCC 840567 Query 145453 CTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGG 145512 || | ||| | || || || | || |||||| | | || | || Sbjct 840568 TTGCACTCCAATACCTATAGGTCTGTGACGCATGTTAGAATTTTTTGCTTCAGGCACTGG 840627 Query 145513 ATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCG 145572 || |||| || ||||||||||| | ||| | | || |||||| | | Sbjct 840628 GTAAAAATTAACATCAATAATTTTATTAAGGTTCTGTGTGATTATCTTTGTGACTTCTTT 840687 Query 145573 CAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGA 145632 ||||||| ||||| | | | || | ||| | ||||| | || || || Sbjct 840688 CAACTTTATAAAGTTGTA---TGTTTTATCTTCATTAACAAACCTATTCAAAGCAATTGA 840744 Query 145633 CGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAA 145692 || ||||||||||| || || || || |||||| || || |||| |||||| Sbjct 840745 AGCTAAATTACAAACAGCAACTTCATCTGCTGAAGTGTATTCCACAATTTCGGTGCACAA 840804 Query 145693 ATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTT 145752 ||| || ||||| ||||| || ||||||| ||||||||||| || || || | || || Sbjct 840805 ATTACTGCATTTTATGGTGCCAAGATTTTTTTGATTACTTTTTCTATTACATGAATCTTT 840864 Query 145753 GTAGAGCATGTACGGTCCGCCAGTCTCCACCTG 145785 || |||||||| ||| ||| || ||||| || Sbjct 840865 ATACAGCATGTATGGTGTGCCCGTTTCCACTTG 840897 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 || ||| || || | || || ||||| || |||||||| ||| || || || || Sbjct 515389 CAACACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAACGTACGTCCATC 515330 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 |||| ||| ||||| ||| |||| || | ||||| || || || || || |||||||| Sbjct 515329 TTCTAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCCTCTTTGTC 515270 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 |||||| || | | || | ||| || | || || | || | || | ||| Sbjct 515269 TTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTAACGTTATGGT 515210 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||||| || || ||||||||||| |||||||| Sbjct 515209 TTTACCCGTGAGGGTTTTTACGAAGATCTGCAT 515177 >seq61578 Length=3623949 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| ||||| || || | || |||||||| || |||||||||||| Sbjct 3476202 GCCGCCGCGAAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 3476143 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||||| | ||| ||||| ||| |||| | ||| |||||||| || || Sbjct 3476142 GAGTGTACGACCATCCTCCAACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGG 3476083 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||| ||||||||||| |||||| |||| | | | ||||| ||| || | | || | Sbjct 3476082 GATACCTTCTTTGTCTTGGATTTT-AGCTTTAACGTTCTCCATAGTGTCTGAAGGTTCAA 3476024 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || |||| ||| || ||||| |||||||| Sbjct 3476023 CTTCGAGGGTGATGGTCTTTCCTGTTAAAGTCTTGACGAAGATCTGCAT 3475975 Score = 109 bits (120), Expect = 5e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | |||||||| ||||| ||||| || || | Sbjct 3475973 CCACCACGGAGACGGAGTACCAAGTGGAGTGTCGACTCTTTTTGGATGTTATAGTC--TG 3475916 Query 131068 ATGGTGCGCGAG--TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || ||| ||| ||||| | ||| ||||| ||| |||| | ||| |||||||| || | Sbjct 3475915 ATAGTGTACGACCATCCTCCAACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGG 3475856 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCG 131184 |||| ||||||||||| |||||| |||| | | | ||| | ||| || | || || Sbjct 3475855 GGATACCTTCTTTGTCTTGGATTTT-AGCTTTAACGTTCTCGATAGTGTCTGAGGGTTCA 3475797 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | |||| ||||| || || || || | || || ||||| |||||||| Sbjct 3475796 ACTTCGAGGGTAATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 3475747 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || |||||||| | ||| ||||| || ||||||||||| || | Sbjct 3474210 CCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGAC 3474151 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||| | ||| ||| |||| || | ||||||| | || ||| Sbjct 3474150 AATGTGCGTCCATCTTCCAGCTGTTCGCCGGCGAAGATCAATCTCTGCTGGGCTGGGGGG 3474091 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || || | | ||| | Sbjct 3474090 ATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAAGGCTCCACC 3474031 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || | || || |||||||||||||| Sbjct 3474030 TCTAAGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAAATCTGCAT 3473984 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || |||||||| | ||| ||||| || ||||||||||| || | Sbjct 3474438 CCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGAC 3474379 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||| ||||| ||| |||| || | ||||||||| || ||| Sbjct 3474378 AATGTGCGTCCATCTTCCAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGG 3474319 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || || | || || | Sbjct 3474318 ATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAACT 3474259 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| || || | || || || || |||||||| Sbjct 3474258 TCTAATGTGATGGTTTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474212 >seq26895 Length=1000185 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/145 (75%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 51800 TGGCCTCTATGTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTG-- 51857 |||| || ||||||||||| ||||| ||||| ||| | |||| |||||| ||||| || Sbjct 288921 TGGCTTCAATGTTGCCGAGGTCGCCGACGTGACGCACAGCGGCGTTGGGGGCGCCATGCT 288862 Query 51858 -GTGTTTGCCAAGGGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGC 51916 || ||| ||| |||||||| | || || || ||||| || || || |||| | Sbjct 288861 CCTGCTTG---TTGGGGTTAAAGTGGGCACCTGCAGATGTGCAACCATTTGTGTTGTCAC 288805 Query 51917 CGAACTCGTGCACGTGAAAGCCGTG 51941 | ||||||||||| ||||| ||||| Sbjct 288804 CAAACTCGTGCACATGAAAACCGTG 288780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471639986590080