Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq46792 91.5 1e-13 >seq46792 Length=1178884 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || |||||||| || | ||||| || || || |||||||||||||| ||||| || || Sbjct 183515 CCTGTAACATGTGCTATCATATGTGTCAAAAGTGAATAGCTGGCAATATTAAACGGCACA 183456 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 |||| ||||||||| | || ||||||| ||| | | || ||||| ||| Sbjct 183455 CCCAGTCCCATGTCTGCACTTCTTTGATACATTAAGCAGTTCAATTTTCCATCAGCCACA 183396 Query 20360 T-AAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGAC-AAG-TCCGCCGGG 20416 | || | |||| |||| || || || || | ||||| ||| ||| || | ||| Sbjct 183395 TGGAACTGGACAAGACAA-TGGCAAGGAGGTAATGCCAT--TTGACTAAGATCTGATGGG 183339 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTT 20458 ||||| |||||||| || || || |||||| ||||||||| Sbjct 183338 TTCCATGCACACATTATCATCCTCCTATCGGCTGGATTATTT 183297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441024187211080