Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq31034 141 7e-29 >seq31034 Length=2072735 Score = 141 bits (156), Expect = 7e-29 Identities = 93/99 (94%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG-TAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||| Sbjct 2067412 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACCGAGGTAAGATCTAAGGAAC 2067471 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||||||||||||||||||||||||| ||||||| ||||| Sbjct 2067472 CAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 2067510 Score = 141 bits (156), Expect = 7e-29 Identities = 93/99 (94%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG-TAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||| Sbjct 2067412 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACCGAGGTAAGATCTAAGGAAC 2067471 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||||||||||||||||||||||||| ||||||| ||||| Sbjct 2067472 CAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 2067510 Score = 82.4 bits (90), Expect = 6e-11 Identities = 50/52 (96%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 2067350 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 2067401 Score = 82.4 bits (90), Expect = 6e-11 Identities = 50/52 (96%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 2067350 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 2067401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396756625595974