Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq48925 87.8 2e-12 >seq48925 Length=1097090 Score = 87.8 bits (96), Expect = 2e-12 Identities = 189/279 (68%), Gaps = 13/279 (5%) Strand=Plus/Plus Query 114352 CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411 ||| || |||||||| ||| |||| |||| || || | |||| | |||||||| Sbjct 840622 CACTGGGTAAAAATTAACATCAATAATTTTATTAAGGTTCTGTGTGATTATCTTTGTGAC 840681 Query 114412 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGACATACTTAGGAAG 114468 ||| | | |||| || ||| || || | ||||||| ||| || || | Sbjct 840682 TTCTTTCAACTTT-----AT-AAAGTTGTATGTTTTATCTTCATTAACAAACCTATTCAA 840735 Query 114469 GGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATT 114526 || ||||| || | |||||| |||| ||||| || | |||||| || | |||| Sbjct 840736 AGCAATTGAAGCTAAATTACAAACAGCAACTTCATCTGCTGA--AGTGTATTCCACAATT 840793 Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586 || || |||||||| | || |||||||| | || |||||||| ||| | ||| Sbjct 840794 TCGGTGCACAAATTACTGCATTTTATGGTGCCAAGATTTTTTTGATTACTTTTTCTATTA 840853 Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 || | ||| || || ||||||||||| || ||||| ||| Sbjct 840854 CATGAATCTTTATACAGCATGTATGGTGTGCCCGTTTCC 840892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596881787725960