Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq48925 114 9e-21 seq26895 95.1 9e-15 seq61578 86.0 4e-12 >seq48925 Length=1097090 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | || || || || ||||| || || || || || |||||||| ||| | Sbjct 515403 CCTCCTCGAAGCCTCAACACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCG--G 515346 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || || | |||||||| |||||||| ||| | ||||| | || || || || Sbjct 515345 ACAACGTACGTCCATCTTCTAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTG 515286 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || || ||||| |||||| ||||||| |||| ||||| || ||| | Sbjct 515285 GAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAA 515226 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | ||||| || ||||||||||| || || |||||||| || || ||||| Sbjct 515225 CCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTTACGAAGATCTGCAT 515177 >seq26895 Length=1000185 Score = 95.1 bits (104), Expect = 9e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 90624 AATATTTCCTAAATCGCCAACGTGTCGTTCAATGGCATTTGGTGCGCCGTGATCGCGTCC 90683 ||| || || | ||||| ||||| || || ||| || || ||||| || || | Sbjct 288914 AATGTTGCCGAGGTCGCCGACGTGACGCACAGCGGCGTTGGGGGCGCCATGCTCCTGCTT 288855 Query 90684 GGTGGGATTAAAATGTTCGCCCGCAGATGTGCAACCGTTAGTTGTGTCACCAAATTCGTG 90743 | |||| ||||| || | || |||||||||||||| || || |||||||||| ||||| Sbjct 288854 GTTGGGGTTAAAGTGGGCACCTGCAGATGTGCAACCATTTGTGTTGTCACCAAACTCGTG 288795 Query 90744 CACATGAAAACCGTG 90758 ||||||||||||||| Sbjct 288794 CACATGAAAACCGTG 288780 >seq61578 Length=3623949 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| || || || |||||||||||| ||| | | | || || Sbjct 3476183 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGTGTACGACCATCCTCC 3476124 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || |||||||| ||| | || | ||| || ||||| || || ||||| ||||| Sbjct 3476123 AACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATACCTTCTTTGTCTTGG 3476064 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| ||| || | || ||||| || | ||| || || | ||| ||||| || Sbjct 3476063 ATTTTAGCTTTAACGTTCTCCATAGTGTCTGAAGGTTCAACTTCGAGGGTGATGGTCTTT 3476004 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| | ||| || || || || |||||| Sbjct 3476003 CCTGTTAAAGTCTTGACGAAGATCTGCATA 3475974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357116775436295