Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq61578 170 4e-37 seq48925 120 7e-22 >seq61578 Length=3623949 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| ||||| || || || |||||||||| || || | ||||| || | ||| Sbjct 3476178 GTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGTGTACGACCATCCTCCAACTG 3476119 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || ||||||||||| ||||| |||||||| || || |||||||||||||| ||||| Sbjct 3476118 TTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATACCTTCTTTGTCTTGGATTTT 3476059 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || |||||||| || ||||| ||| ||| ||||| ||||| | ||||||||||| Sbjct 3476058 AGCTTTAACGTTCTCCATAGTGTCTGAAGGTTCAACTTCGAGGGTGATGGTCTTTCCTGT 3475999 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||||| || ||||| | ||||| Sbjct 3475998 TAAAGTCTTGACGAAGATCTGCAT 3475975 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||||||||| || || || || | || || | ||||| || | ||| Sbjct 3475950 GTGGAGTGTCGACTCTTTTTGGATGTTATAGTCTGATAGTGTACGACCATCCTCCAACTG 3475891 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || ||||||||||| ||||| |||||||| || || |||||||||||||| ||||| Sbjct 3475890 TTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATACCTTCTTTGTCTTGGATTTT 3475831 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || |||||||| || ||||| || ||| ||||| ||||||| ||||| || || Sbjct 3475830 AGCTTTAACGTTCTCGATAGTGTCTGAGGGTTCAACTTCGAGGGTAATAGTCTTGCCAGT 3475771 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 3475770 CAAGGTCTTGACGAAGATCTGCAT 3475747 >seq48925 Length=1097090 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || ||||| || | |||||| || || || || || || ||||| |||| | || | Sbjct 515394 AGCCTCAACACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAACGTACGT 515335 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | ||| || || |||||||| | || ||| || ||||| |||||||| ||| Sbjct 515334 CCATCTTCTAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCCTCT 515275 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||||||||| || || || || || ||||| || ||| || || | || Sbjct 515274 TTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTAACGTT 515215 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || || || || | ||||||||||| | |||||| Sbjct 515214 ATGGTTTTACCCGTGAGGGTTTTTACGAAGATCTGCATT 515176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108583382072429