Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq18715 352 2e-92 seq48925 134 1e-26 >seq18715 Length=1377716 Score = 352 bits (390), Expect = 2e-92 Identities = 728/1066 (68%), Gaps = 29/1066 (3%) Strand=Plus/Minus Query 42470 TCTATAGTCTACGACGCCATCTTCCCAAGTACCCGAAACTGGACCTGTCGCAATACCCGT 42529 |||||| || || || || |||| ||||||||| || || || ||||| | || || Sbjct 1370961 TCTATAATCAACTACACCGTCTTGCCAAGTACCTTTGACAGGTCCAGTCGCGTTGCCAGT 1370902 Query 42530 GAAGGGATTATTGTTTTGGTAATTGCTTACTCCGGTCCAACCTCGTCCGTACATGGCCAC 42589 ||| ||||| || |||| ||| ||| || |||||||| |||||||||||||| || || Sbjct 1370901 GAATGGATTGTTATTTTCGTAGTTGTGAACCCCGGTCCAGCCTCGTCCGTACATAGCTAC 1370842 Query 42590 GCCTAAAATTATTTTTTGAGGTTTCACTTTTTGTTTCAA--AAGCGTTTGAACGGCATAA 42647 || | | || || | ||| || || ||| ||| || ||| | | || | Sbjct 1370841 ACCCACCACAATCTTCTTAGGGTTGACGCCTTGAG-CAAGCAAATATTTCA-CACCAAAG 1370784 Query 42648 TCTGCCGTGTAATGTTCGTTTTCGTTCCATTCGGGAGCATACAGATTTGTTTGATGGCCC 42707 || | || ||| ||| || |||||| | ||||| || || ||| ||||| || Sbjct 1370783 TCAGTGGTATAAGTTTCCTTGGGGTTCCAAGCAGGAGCGTAAAGCGGTGTCTGATGACCG 1370724 Query 42708 AAATCTGAATTTGACCAAGCACCTTTAAAGTCATAGCTCATTAAAAATATTTTATCCAAA 42767 | ||| ||||| || |||||||| ||||| ||||| | || || | ||||| Sbjct 1370723 AGGGTGTCATTAGACCAGGCGCCTTTAAAATCATAACTCATGAGGAAAATGTGATCCATG 1370664 Query 42768 TAGTTTTGAGCATCGTTGTAATCGACAATAGCGATTTTGTCGTCTCCCGCACTAATTGCG 42827 || || ||||| ||| |||||||||| | || || || ||| |||||||| ||| Sbjct 1370663 TATTTCTGAGCCTCGCTGTAATCGACCACTTGAATCTTATCCCATCCAGCACTAATAGCG 1370604 Query 42828 CTAGTCAATTCGTATTTGCGATTAGTTTCGTTTTCTAGTTCGTCCAGCATGTCGCGCAAT 42887 ||||| |||||||| | || || | || |||| || ||| || |||||| Sbjct 1370603 GAAGTCAGCTCGTATTTCTTACCGGTCTCTTCAGAAAGGTCGTTCAACATTTCACGCAAT 1370544 Query 42888 TCTCGTAACAAAACTACATACGTAAGA----CCGTCATTTTGAGGATCTCCAATTGTC-G 42942 || | | | || | || |||||| ||||| || ||| ||| | ||| | Sbjct 1370543 TC-CTTCATTAA--TTCA-ACGTAAACATCTCCGTCCTT---AGGGCTTCCTAG-GTCAG 1370492 Query 42943 GATTAGCTCCTTTACCACCGGGAAATTCCCAATCAATATCGACGCCGTCAAAAAATTTCC 43002 | |||||||| ||||| || || ||||||||||| ||||| || ||||| || || |||| Sbjct 1370491 GGTTAGCTCCCTTACCGCCAGGGAATTCCCAATCGATATCAACACCGTCGAAGAACTTCC 1370432 Query 43003 AAGTGAGCAAAAACTCACGTACTGAATCCACAAATATTTTACGCTTGTTTGCATCGCTGA 43062 | || || | ||| || || ||||| || || | ||| | | ||| ||| Sbjct 1370431 AGGTTAGAAGAAAATCTTTCACAGAATCAACGAAGCGACCTCTCTTCTCTTTGTCGGTGA 1370372 Query 43063 AAAAATAAAACGGGTCGGACAATGTCCATCCACCTATCGAAGGTAACACTTTAAGATGAG 43122 | || | || || |||| | ||||| || || || ||||||| | |||||| | || Sbjct 1370371 AGAAGAAGAAGGGATCGGCAAGAGTCCAGCCTCCGATGGAAGGTAGAATTTTAAGTTCAG 1370312 Query 43123 GGTTAGCTTTTTTGGCTGCCATTAATTGACCAAAGTTGCCTTTGTACGGTTCATTCCACG 43182 | | |||| |||| | ||| | |||||||||||||||||||| ||||||||||| | Sbjct 1370311 GCCTGGCTTGTTTGAGAGACATCAGCTGACCAAAGTTGCCTTTGTATGGTTCATTCCAGG 1370252 Query 43183 AGGAAACACCTTTTTGTGGTTTCTGTATAGCCGCCCACGGATCGTGTATGGAAACTTTGA 43242 | || | || || ||||| ||||| | ||| |||||||| ||||| || |||||||||| Sbjct 1370251 AAGACAGTCCCTTCTGTGGCTTCTGAAGAGCGGCCCACGGGTCGTGAATAGAAACTTTGA 1370192 Query 43243 AGTCGCTTCGAC-CCGCA-CAAGATTTTTGAAGAGCTTCAAAACTGCCAGGAATAGATTT 43300 | || |||| |||| || ||| ||||||||||| |||||||| || || Sbjct 1370191 AATC--TTCGCGGCCGCTGCATGATCGTTGAAGAGCTTGGAAACTGCCTTCGATCTCCTT 1370134 Query 43301 TAAACTGTCATTAATGCCGTCACCGCCGCATATCGGAATAAATCCGTACAACAAATGAGA 43360 ||||||||| || |||||||| || ||||| || ||||| || |||||||| | ||| | Sbjct 1370133 TAAACTGTCGTTGATGCCGTCGCCTCCGCAAATAGGAATGAAACCGTACAAAAGATGCGT 1370074 Query 43361 CAAATTGGGTAAAGGCACTTTGTTGACAGGAAATGAACGACCGTATACGCCCCATTCTAC 43420 || ||| || | || || | ||| || ||| | ||| || |||||||| || Sbjct 1370073 CAGATTAGGAATCGGTACACGATCGACTGGGAATTTTCTTGGGTAAACACCCCATTCAAC 1370014 Query 43421 AAAATAAGCGGCCACGGCTTTATCGGTGCCCAATTCGAAAGGTTTATTGTTTTCTTGCCA 43480 ||| || || | || |||| | | | | || ||| || ||||| || ||| ||| Sbjct 1370013 AAAGTACGCTCCGACAACTTTTCCTGAACTCTGTTTGAATGGCTTATTCTTCTCT--CCA 1369956 Query 43481 ----TGTATATGGCAAAGGATCTAAATGCGAACCGTCCGTATCAGC 43522 |||| || ||| ||| || ||| |||||| |||||||| Sbjct 1369955 AGGGTGTACAT--CAATGGAGGTAGATGGCTACCGTCAGTATCAGC 1369912 >seq48925 Length=1097090 Score = 134 bits (148), Expect = 1e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 101237 ACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAA 101296 ||||| ||||||| | | || || || ||||| || ||||| || || || ||||| Sbjct 515409 ACATTACCTCCTCGAAGCCTCAACACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAG 515350 Query 101297 TCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCG 101356 |||| | || | |||| || || || || || || || ||||| | || ||||| Sbjct 515349 TCGGACAACGTACGTCCATCTTCTAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCT 515290 Query 101357 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTT 101416 || |||||||| ||||| ||||||||||| ||||||| |||| | ||||||||| | | Sbjct 515289 GGTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCT 515230 Query 101417 TCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || || || | || | ||||| || || | |||||||| || |||||||| ||| Sbjct 515229 TCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTTACGAAGATCTGCATTGTT 515173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395973229347759