Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq48068 86.0 1e-11 >seq48068 Length=254185 Score = 86.0 bits (94), Expect = 1e-11 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 25581 GCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAA 25640 ||| ||| | || | ||||||||||| ||||| || |||||||||||||| || ||||| Sbjct 224690 GCACTTTATTAAACATGTGTTGGCATTTTTTGCTGCTTCTGATGGTATAGTAAATGAGAA 224749 Query 25641 TCT-GT-GCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGT 25698 | | || | | || ||||| | ||||| || || || || | || || || || Sbjct 224750 TTTAGTAGAGCGATTTTCACAA--GAAGTTCAAATCGGTGAAGCAAGGTTCTTTTATGGA 224807 Query 25699 TTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 || || || || || |||||||| ||||||||| |||| Sbjct 224808 TTTCAAATCGCTATGGAAAATGTACACTCTGAGATGTA 224845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928111163545280